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WormBase Tree Display for CDS: ZK287.4b

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Name Class

ZK287.4bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceZK287
StructureSource_exons (14)
DB_infoDatabaseTrEMBLUniProtAccG3MU07
UniProtUniProtAccG3MU07
AlphaFoldentryG3MU07
NCBI_proteinGI_numberGI:345109087
Protein_idCHROMOSOME_VCCD311721
DB_remarkcontains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF14625 (Lustrin, cysteine-rich repeated domain); contains similarity to Interpro domains IPR028150 (Lustrin, cysteine-rich repeated), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR006150 (Cysteine-rich repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformFrom_analysisRNASeq_Hillier_elegans
VisibleGeneWBGene00013965
Corresponding_transcriptZK287.4b.1
Corresponding_proteinCE46508
Corresponding_PCR_productcenix:64-g1
mv_ZK287.4
sjj_ZK287.4
Corresponding_oligo_set (19)
RNAi_resultWBRNAi00059330
WBRNAi00021947
WBRNAi00038254
WBRNAi00089218
Microarray_results (21)
Brief_identificationBPTI/Kunitz inhibitor domain-containing proteinAccession_evidenceUniProtTR:G3MU07
RNASeq_FPKM (74)
Last_reviewed22 Aug 2011 00:00:00WBPerson4025
Remark[110822 gw3] Created this isoform based on the RNAseq intron splice data.From_analysisRNASeq_Hillier_elegans
Methodcurated