WormBase Tree Display for CDS: ZK287.4b
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ZK287.4b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK287 | |||
Structure | Source_exons (14) | |||||
DB_info | Database | TrEMBL | UniProtAcc | G3MU07 | ||
UniProt | UniProtAcc | G3MU07 | ||||
AlphaFold | entry | G3MU07 | ||||
NCBI_protein | GI_number | GI:345109087 | ||||
Protein_id | CHROMOSOME_V | CCD31172 | 1 | |||
DB_remark | contains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF14625 (Lustrin, cysteine-rich repeated domain); contains similarity to Interpro domains IPR028150 (Lustrin, cysteine-rich repeated), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR006150 (Cysteine-rich repeat) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | From_analysis | RNASeq_Hillier_elegans | ||||
Visible | Gene | WBGene00013965 | ||||
Corresponding_transcript | ZK287.4b.1 | |||||
Corresponding_protein | CE46508 | |||||
Corresponding_PCR_product | cenix:64-g1 | |||||
mv_ZK287.4 | ||||||
sjj_ZK287.4 | ||||||
Corresponding_oligo_set (19) | ||||||
RNAi_result | WBRNAi00059330 | |||||
WBRNAi00021947 | ||||||
WBRNAi00038254 | ||||||
WBRNAi00089218 | ||||||
Microarray_results (21) | ||||||
Brief_identification | BPTI/Kunitz inhibitor domain-containing protein | Accession_evidence | UniProt | TR:G3MU07 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 22 Aug 2011 00:00:00 | WBPerson4025 | ||||
Remark | [110822 gw3] Created this isoform based on the RNAseq intron splice data. | From_analysis | RNASeq_Hillier_elegans | |||
Method | curated |