WormBase Tree Display for CDS: Y47D3A.14
expand all nodes | collapse all nodes | view schema
Y47D3A.14 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y47D3A | |||
Structure | Source_exons | 1 | 50 | |||
120 | 222 | |||||
274 | 426 | |||||
475 | 675 | |||||
722 | 950 | |||||
1120 | 1247 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q9NAH8 | ||
UniProt | UniProtAcc | Q9NAH8 | ||||
UniProt_GCRP | UniProtAcc | Q9NAH8 | ||||
AlphaFold | entry | Q9NAH8 | ||||
NCBI_protein | GI_number | GI:19571667 | ||||
TREEFAM | TREEFAM_ID | TF313277 | ||||
Protein_id | CHROMOSOME_III | CAB55073 | 2 | |||
DB_remark | contains similarity to Pfam domain PF00383 (Cytidine and deoxycytidylate deaminase zinc-binding region); contains similarity to Interpro domains IPR016193 (Cytidine deaminase-like), IPR002125 (Cytidine and deoxycytidylate deaminase domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00012927 | ||||
Corresponding_transcript | Y47D3A.14.1 | |||||
Corresponding_protein | CE30359 | |||||
Corresponding_PCR_product | TH:332A9 | |||||
cenix:232-g10 | ||||||
cenix:332-a9 | ||||||
mv_Y47D3A.14 | ||||||
sjj2_Y47D3A.14 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (39) | ||||||
RNAi_result | WBRNAi00056733 | |||||
WBRNAi00006869 | ||||||
WBRNAi00056734 | ||||||
Microarray_results (15) | ||||||
Brief_identification | CMP/dCMP-type deaminase domain-containing protein | Accession_evidence | UniProt | TR:Q9NAH8 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 25 Feb 2002 00:00:00 | WBPerson3103 | ||||
Remark | [020225 kj] Shortened down to 6 exons according to WTP data. | |||||
Associated_feature | WBsf127109 | |||||
Method | curated |