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WormBase Tree Display for CDS: Y47D3A.14

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Name Class

Y47D3A.14EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY47D3A
StructureSource_exons150
120222
274426
475675
722950
11201247
DB_infoDatabaseTrEMBLUniProtAccQ9NAH8
UniProtUniProtAccQ9NAH8
UniProt_GCRPUniProtAccQ9NAH8
AlphaFoldentryQ9NAH8
NCBI_proteinGI_numberGI:19571667
TREEFAMTREEFAM_IDTF313277
Protein_idCHROMOSOME_IIICAB550732
DB_remarkcontains similarity to Pfam domain PF00383 (Cytidine and deoxycytidylate deaminase zinc-binding region); contains similarity to Interpro domains IPR016193 (Cytidine deaminase-like), IPR002125 (Cytidine and deoxycytidylate deaminase domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00012927
Corresponding_transcriptY47D3A.14.1
Corresponding_proteinCE30359
Corresponding_PCR_productTH:332A9
cenix:232-g10
cenix:332-a9
mv_Y47D3A.14
sjj2_Y47D3A.14
Corresponding_oligo_set (15)
Matching_cDNA (39)
RNAi_resultWBRNAi00056733
WBRNAi00006869
WBRNAi00056734
Microarray_results (15)
Brief_identificationCMP/dCMP-type deaminase domain-containing proteinAccession_evidenceUniProtTR:Q9NAH8
RNASeq_FPKM (74)
Last_reviewed25 Feb 2002 00:00:00WBPerson3103
Remark[020225 kj] Shortened down to 6 exons according to WTP data.
Associated_featureWBsf127109
Methodcurated