WormBase Tree Display for CDS: W08A12.1e
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W08A12.1e | Evidence | Curator_confirmed | WBPerson4025 | |||
---|---|---|---|---|---|---|
Inferred_automatically | make_isoforms.pl | |||||
SMap | S_parent | Sequence | W08A12 | |||
Structure | Source_exons (5) | |||||
DB_info | Database | TrEMBL | UniProtAcc | A0A168H9Z7 | ||
UniProt | UniProtAcc | A0A168H9Z7 | ||||
AlphaFold | entry | A0A168H9Z7 | ||||
NCBI_protein | GI_number | GI:1027499700 | ||||
Protein_id | CHROMOSOME_V | SAP35597 | 1 | |||
DB_remark | UNC-132 protein; contains similarity to Pfam domain PF13521 (AAA domain); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR038727 (NadR/Ttd14, AAA domain), IPR033469 (CYTH-like domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson4025 | ||||
Feature_evidence | WBsf002520 | |||||
Visible | Gene | WBGene00021078 | ||||
Corresponding_transcript | W08A12.1e.1 | |||||
Corresponding_protein | CE51676 | |||||
Corresponding_PCR_product | cenix:48-d9 | |||||
mv_W08A12.1 | ||||||
sjj2_W08A12.1a | ||||||
sjj_W08A12.1 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA | male_Nanopore_Roach_50259 | |||||
young_adult_Nanopore_Roach_41650 | ||||||
male_Nanopore_Roach_40835 | ||||||
L2_Nanopore_Roach_45154 | ||||||
adult_Nanopore_Roach_1812 | ||||||
L1_Nanopore_Roach_35810 | ||||||
adult_Nanopore_Roach_43566 | ||||||
RNAi_result | WBRNAi00036369 | |||||
WBRNAi00097780 | ||||||
WBRNAi00054968 | ||||||
WBRNAi00097779 | ||||||
Microarray_results (23) | ||||||
Brief_identification | NadR/Ttd14 AAA domain-containing protein | Accession_evidence | UniProt | TR:A0A168H9Z7 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 07 Mar 2016 14:09:47 | WBPerson4025 | ||||
Remark | [160307 gw3] Created this isoform based on the RNASeq splice data and the SL1 site. | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf002520 | |||||
From_analysis | RNASeq | |||||
Method | curated |