WormBase Tree Display for CDS: T20H9.1
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| T20H9.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T20H9 | |||
| Structure | Source_exons | 1 | 80 | |||
| 568 | 1198 | |||||
| 1250 | 1477 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O44892 | ||
| UniProt | UniProtAcc | O44892 | ||||
| UniProt_GCRP | UniProtAcc | O44892 | ||||
| AlphaFold | entry | O44892 | ||||
| NCBI_protein | GI_number | GI:373254163 | ||||
| TREEFAM | TREEFAM_ID | TF322006 | ||||
| Protein_id | CHROMOSOME_III | CCD67061 | 1 | |||
| DB_remark | FBXA-7 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
| Origin (2) | ||||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00020637 | ||||
| Corresponding_transcript | T20H9.1.1 | |||||
| Corresponding_protein | CE39410 | |||||
| Corresponding_PCR_product | TH:328C8 | |||||
| cenix:328-c8 | ||||||
| mv_T20H9.1 | ||||||
| sjj_T20H9.1 | ||||||
| Corresponding_oligo_set (12) | ||||||
| Matching_cDNA | FM247301 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00006611 | |||||
| WBRNAi00053677 | ||||||
| WBRNAi00018937 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:O44892 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 17 Nov 2005 00:00:00 | WBPerson1849 | ||||
| Remark | [20051117 tb] modified 5' exon based on data from Jim Thomas. | Curator_confirmed | WBPerson1849 | |||
| Method | curated |
