WormBase Tree Display for CDS: T19B10.11
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| T19B10.11 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T19B10 | |||
| Structure | Source_exons | 1 | 318 | |||
| 949 | 1005 | |||||
| DB_info | Database | SwissProt | UniProtAcc | G5EEH5 | ||
| UniProt | UniProtAcc | G5EEH5 | ||||
| UniProt_GCRP | UniProtAcc | G5EEH5 | ||||
| AlphaFold | entry | G5EEH5 | ||||
| NCBI_protein | GI_number | GI:3879919 | ||||
| Protein_id | CHROMOSOME_V | CAA98543 | 1 | |||
| DB_remark | MXL-1 protein; contains similarity to Pfam domain PF00010 (Helix-loop-helix DNA-binding domain); contains similarity to Interpro domains IPR002418 (Transcription regulator Myc), IPR036638 (Helix-loop-helix DNA-binding domain superfamily), IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003509 | ||||
| Corresponding_transcript | T19B10.11.1 | |||||
| Corresponding_protein | CE16417 | |||||
| Corresponding_PCR_product | cenix:167-g6 | |||||
| mv_AAB40926 | ||||||
| sjj_T19B10.11 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (24) | ||||||
| RNAi_result | WBRNAi00018816 | |||||
| WBRNAi00061886 | ||||||
| WBRNAi00115841 | ||||||
| WBRNAi00027699 | ||||||
| WBRNAi00115664 | ||||||
| WBRNAi00053490 | ||||||
| WBRNAi00090663 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Max-like protein 1 | Accession_evidence | UniProt | SP:G5EEH5 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | Annotated using Pfam | |||||
| Associated_feature | WBsf020042 | |||||
| Method | curated |
