WormBase Tree Display for CDS: T12D8.6
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| T12D8.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T12D8 | |||
| Structure | Source_exons | 1 | 78 | |||
| 127 | 263 | |||||
| 314 | 420 | |||||
| 536 | 642 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q9XVI9 | ||
| UniProt | UniProtAcc | Q9XVI9 | ||||
| UniProt_GCRP | UniProtAcc | Q9XVI9 | ||||
| AlphaFold | entry | Q9XVI9 | ||||
| NCBI_protein | GI_number | GI:3879795 | ||||
| Protein_id | CHROMOSOME_III | CAB03346 | 1 | |||
| DB_remark | MLC-5 protein; contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011734 | ||||
| Corresponding_transcript | T12D8.6.1 | |||||
| Corresponding_protein | CE16403 | |||||
| Corresponding_PCR_product | TH:321F4 | |||||
| cenix:321-f4 | ||||||
| mv_T12D8.6 | ||||||
| sjj_T12D8.6 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (78) | ||||||
| RNAi_result | WBRNAi00026280 | |||||
| WBRNAi00114573 | ||||||
| WBRNAi00080589 | ||||||
| WBRNAi00009163 | ||||||
| WBRNAi00006085 | ||||||
| WBRNAi00053206 | ||||||
| WBRNAi00088552 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Myosin-2 essential light chain | Accession_evidence | UniProt | SP:Q9XVI9 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | Annotated using Pfam | |||||
| Associated_feature | WBsf002755 | |||||
| Method | curated |
