WormBase Tree Display for CDS: T05E11.1
expand all nodes | collapse all nodes | view schema
T05E11.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T05E11 | |||
Structure | Source_exons | 1 | 66 | |||
164 | 433 | |||||
485 | 613 | |||||
662 | 829 | |||||
DB_info | Database | SwissProt | UniProtAcc | P49041 | ||
UniProt | UniProtAcc | P49041 | ||||
UniProt_GCRP | UniProtAcc | P49041 | ||||
AlphaFold | entry | P49041 | ||||
NCBI_protein | GI_number | GI:3879461 | ||||
TREEFAM | TREEFAM_ID | TF300872 | ||||
Protein_id | CHROMOSOME_IV | CAA92971 | 1 | |||
DB_remark | RPS-5 protein; contains similarity to Pfam domain PF00177 (Ribosomal protein S7p/S5e); contains similarity to Interpro domains IPR005716 (Ribosomal protein uS7, eukaryotic/archaeal), IPR023798 (Small ribosomal subunit protein uS7 domain), IPR000235 (Small ribosomal subunit protein uS7), IPR036823 (Small ribosomal subunit protein uS7 domain superfamily) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004474 | ||||
Corresponding_transcript | T05E11.1.1 | |||||
Corresponding_protein | CE06360 | |||||
Corresponding_PCR_product | WBPaper00038381:T05E11_1_1 | |||||
cenix:100-f10 | ||||||
mv_T05E11.1 | ||||||
sjj_T05E11.1 | ||||||
smd_9T05E11.1 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (531) | ||||||
RNAi_result (26) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Small ribosomal subunit protein uS7 | Accession_evidence | UniProt | SP:P49041 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 15 Apr 2014 00:00:00 | WBPerson4025 | ||||
Associated_feature | WBsf000884 | |||||
WBsf015861 | ||||||
Method | curated |