WormBase Tree Display for CDS: T04A8.13
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| T04A8.13 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T04A8 | |||
| Structure | Source_exons | 1 | 93 | |||
| 579 | 1119 | |||||
| 1168 | 1229 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q22142 | ||
| UniProt | UniProtAcc | Q22142 | ||||
| UniProt_GCRP | UniProtAcc | Q22142 | ||||
| AlphaFold | entry | Q22142 | ||||
| NCBI_protein | GI_number | GI:198447197 | ||||
| Protein_id | CHROMOSOME_III | CAA84732 | 3 | |||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011414 | ||||
| Corresponding_transcript | T04A8.13.1 | |||||
| Corresponding_protein | CE43013 | |||||
| Corresponding_PCR_product | TH:300E4 | |||||
| cenix:300-e4 | ||||||
| mv_T04A8.13 | ||||||
| sjj_T04A8.13 | ||||||
| Corresponding_oligo_set | GPL14144_T04A8.13_557-616_0.948_1_A | |||||
| GPL19516_CGZ0033031 | ||||||
| GPL21109_T04A8.13 | ||||||
| GPL9450_T04A8.13 | ||||||
| cea2.3.22594 | ||||||
| Matching_cDNA | male_Nanopore_Roach_126693 | |||||
| male_Nanopore_Roach_127578 | ||||||
| young_adult_Nanopore_Roach_79845 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_24132 | Inferred_automatically | transcript_builder.pl | ||||
| FN897698 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_291972 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_283577 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_318066 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG7023|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| yk279h10.3 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00052332 | |||||
| WBRNAi00005050 | ||||||
| WBRNAi00001092 | ||||||
| WBRNAi00018109 | ||||||
| Microarray_results | SMD_T04A8.13 | |||||
| GPL14144_T04A8.13_557-616_0.948_1_A | ||||||
| GPL19516_CGZ0033031 | ||||||
| GPL21109_T04A8.13 | ||||||
| GPL9450_T04A8.13 | ||||||
| cea2.3.22594 | ||||||
| Brief_identification | G-patch domain-containing protein | Accession_evidence | UniProt | TR:Q22142 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 20 Aug 2008 00:00:00 | WBPerson4025 | ||||
| Remark | Prosite: match PS00030 eukaryotic putative RNA binding region RNP | |||||
| [ms2 990823] added the 3rd intron, based on EST data | ||||||
| [080820 gw3] Split T04A8.13 to created T04A8.13 and T04A8.18 based on the twinscan and jigsaw predictions, the weak splice site, the SL1 site and the C. briggsae protein homology. | Protein_id_evidence | BP:CBP06621 | ||||
| Curator_confirmed | WBPerson4025 | |||||
| Method | curated |
