WormBase Tree Display for CDS: R13F6.6c

R13F6.6c Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: R13F6
  Structure: Source_exons (12)
  DB_info: Database (6)
    Protein_id: CHROMOSOME_III CCD70171 1
    DB_remark: ZAK-1 protein; contains similarity to Pfam domains PF07647 (SAM domain (Sterile alpha motif)), PF07714 (Protein tyrosine and serine/threonine kinase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR001660 (Sterile alpha motif domain), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR000719 (Protein kinase domain), IPR013761 (Sterile alpha motif/pointed domain superfamily)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Accession_evidence: EMBL FN901234
  Visible: Gene: WBGene00006971
    Corresponding_transcript: R13F6.6c.1
    Corresponding_protein: CE45943
    Corresponding_PCR_product: TH:314D5
      TH:314E5
      cenix:140-h11
      cenix:314-d5
      cenix:314-e5
      mv_R13F6.6
      mv_R13F6.7
      sjj_R13F6.6
      sjj_R13F6.7
    Corresponding_oligo_set (24)
    Matching_cDNA: male_Nanopore_Roach_107546
      young_adult_Nanopore_Roach_86043
      L2_Nanopore_Roach_68030
      L1_Nanopore_Roach_67593
      L1_Nanopore_Roach_32840
      L3_Nanopore_Roach_55431
      L1_Nanopore_Roach_44934
      L4_Nanopore_Roach_43642
      L3_Nanopore_Roach_63970
    RNAi_result (11)
    Microarray_results (28)
    Brief_identification: Mitogen-activated protein kinase kinase kinase zak-1 Accession_evidence: UniProt SP:H2KZW3
    RNASeq_FPKM (74)
    Last_reviewed: 22 Mar 2011 00:00:00 WBPerson1867
    Remark: made this isoform based on EST data[20110322 po] Accession_evidence: EMBL FN901234
  Method: curated