WormBase Tree Display for CDS: R07B7.6b
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| R07B7.6b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R07B7 | |||
| Structure | Source_exons | 1 | 20 | |||
| 103 | 568 | |||||
| 615 | 768 | |||||
| 939 | 1194 | |||||
| 1240 | 1370 | |||||
| 1418 | 1533 | |||||
| 1582 | 1641 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | I2HA85 | ||
| UniProt | UniProtAcc | I2HA85 | ||||
| AlphaFold | entry | I2HA85 | ||||
| NCBI_protein | GI_number | GI:387912291 | ||||
| Protein_id | CHROMOSOME_V | CCH63792 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF02485 (Core-2/I-Branching enzyme); contains similarity to Interpro domain IPR003406 (Glycosyl transferase, family 14) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Feature_evidence | WBsf020674 | ||||
| Visible | Gene | WBGene00011090 | ||||
| Corresponding_transcript | R07B7.6b.1 | |||||
| Corresponding_protein | CE47604 | |||||
| Corresponding_PCR_product | cenix:103-d4 | |||||
| cenix:140-g9 | ||||||
| mv_R07B7.6 | ||||||
| sjj_R07B7.6 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | male_Nanopore_Roach_51133 | |||||
| young_adult_Nanopore_Roach_52294 | ||||||
| L2_Nanopore_Roach_45869 | ||||||
| L2_Nanopore_Roach_62564 | ||||||
| L1_Nanopore_Roach_26101 | ||||||
| L3_Nanopore_Roach_99806 | ||||||
| RNAi_result | WBRNAi00017524 | |||||
| WBRNAi00051440 | ||||||
| WBRNAi00051439 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Nucleotid_trans domain-containing protein | Accession_evidence | UniProt | TR:I2HA85 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 17 Apr 2012 00:00:00 | WBPerson4025 | ||||
| Remark | [120417 gw3] Created this isoform based on the SL1 feature. | Feature_evidence | WBsf020674 | |||
| Method | curated |
