WormBase Tree Display for CDS: R06C7.5b
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| R06C7.5b | SMap | S_parent | Sequence | R06C7 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 1073 | |||
| 1174 | 1213 | |||||
| DB_info | Database | KEGG | KEGG_id | 4.3.2.2 | ||
| SwissProt | UniProtAcc | Q21774 | ||||
| UniProtIsoformAcc | Q21774-2 | |||||
| UniProt | UniProtAcc | Q21774 | ||||
| UniProt_GCRP | UniProtAcc | Q21774 | ||||
| AlphaFold | entry | Q21774 | ||||
| NCBI_protein | GI_number | GI:25004998 | ||||
| Protein_id | CHROMOSOME_I | CAD56593 | 1 | |||
| DB_remark | ADSL-1 protein; contains similarity to Pfam domain PF00206 (Lyase); contains similarity to Interpro domains IPR008948 (L-Aspartase-like), IPR024083 (Fumarase/histidase, N-terminal), IPR022761 (Fumarate lyase, N-terminal), IPR000362 (Fumarate lyase family) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | CEK067G5F | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00011064 | ||||
| Corresponding_transcript | R06C7.5b.1 | |||||
| Corresponding_protein | CE32476 | |||||
| Corresponding_PCR_product | cenix:25-b7 | |||||
| mv_R06C7.5 | ||||||
| sjj_R06C7.5 | ||||||
| Corresponding_oligo_set (12) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_69424 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_92301 | ||||||
| L4_Nanopore_Roach_46575 | ||||||
| L3_Nanopore_Roach_68761 | ||||||
| L4_Nanopore_Roach_39582 | ||||||
| EM_Nanopore_Li_273481 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_238277 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_261371 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result (18) | ||||||
| Microarray_results (13) | ||||||
| Brief_identification | Adenylosuccinate lyase | Accession_evidence | UniProt | SP:Q21774 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | [alt] Alternate isoform defined by EST yk1256a04 | |||||
| Method | curated |
