WormBase Tree Display for CDS: R01E6.3b
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R01E6.3b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R01E6 | |||
Structure | Source_exons | 1 | 4 | |||
608 | 678 | |||||
764 | 863 | |||||
915 | 1129 | |||||
1383 | 1610 | |||||
1658 | 1747 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q8WQD8 | ||
UniProt | UniProtAcc | Q8WQD8 | ||||
AlphaFold | entry | Q8WQD8 | ||||
NCBI_protein | GI_number | GI:17645967 | ||||
Protein_id | CHROMOSOME_X | CAD18873 | 1 | |||
DB_remark | CAH-4 protein; contains similarity to Pfam domain PF00194 (Eukaryotic-type carbonic anhydrase); contains similarity to Interpro domains IPR036398 (Alpha carbonic anhydrase domain superfamily), IPR001148 (Alpha carbonic anhydrase domain), IPR023561 (Carbonic anhydrase, alpha-class) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | AU209155 | |||
Inferred_automatically | transcript_builder | |||||
Visible | Gene | WBGene00000282 | ||||
Corresponding_transcript | R01E6.3b.1 | |||||
Corresponding_protein | CE29434 | |||||
Corresponding_PCR_product | cenix:88-a7 | |||||
mv_R01E6.3 | ||||||
sjj_R01E6.3 | ||||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA (55) | ||||||
RNAi_result | WBRNAi00000716 | |||||
WBRNAi00027423 | ||||||
WBRNAi00077519 | ||||||
WBRNAi00098178 | ||||||
WBRNAi00017294 | ||||||
WBRNAi00026008 | ||||||
WBRNAi00110318 | ||||||
WBRNAi00077520 | ||||||
WBRNAi00026009 | ||||||
WBRNAi00051096 | ||||||
Microarray_results (19) | ||||||
Brief_identification | Alpha-carbonic anhydrase domain-containing protein | Accession_evidence | UniProt | TR:Q8WQD8 | ||
RNASeq_FPKM (74) | ||||||
Remark | [alt] Splice variant defined by yk794f07.5 [NDB:AU201523] | |||||
Associated_feature | WBsf016913 | |||||
Method | curated |