WormBase Tree Display for CDS: H20J18.1a
expand all nodes | collapse all nodes | view schema
| H20J18.1a | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | H20J18 | |||
| Structure | Source_exons (11) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XXK5 | ||
| UniProt | UniProtAcc | Q9XXK5 | ||||
| AlphaFold | entry | Q9XXK5 | ||||
| NCBI_protein | GI_number | GI:3878071 | ||||
| TREEFAM | TREEFAM_ID | TF350258 | ||||
| Protein_id | CHROMOSOME_X | CAA18898 | 1 | |||
| DB_remark | SCD-1 protein | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | NDB | AV187160 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00004739 | ||||
| Corresponding_transcript | H20J18.1a.1 | |||||
| H20J18.1a.2 | ||||||
| H20J18.1a.3 | ||||||
| Corresponding_protein | CE18818 | |||||
| Corresponding_PCR_product | cenix:53-g12 | |||||
| mv_H20J18.1 | ||||||
| sjj_H20J18.1 | ||||||
| Corresponding_oligo_set (19) | ||||||
| Matching_cDNA (78) | ||||||
| RNAi_result | WBRNAi00001215 | |||||
| WBRNAi00111737 | ||||||
| WBRNAi00080823 | ||||||
| WBRNAi00049450 | ||||||
| WBRNAi00016289 | ||||||
| WBRNAi00067975 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Suppressor of Constitutive Dauer formation | Accession_evidence | UniProt | TR:Q9XXK5 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | [alt] Alternate isoform defined by yk1097h09 | |||||
| Associated_feature | WBsf005907 | |||||
| WBsf027837 | ||||||
| Method | curated |
