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WormBase Tree Display for CDS: F57H12.2

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Name Class

F57H12.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF57H12
StructureSource_exons1224
425500
889984
10401189
12361400
14462066
DB_infoDatabase (5)
Protein_idCHROMOSOME_IVCCD697692
DB_remarkUNC-24 protein; contains similarity to Pfam domains PF01145 (SPFH domain / Band 7 family), PF02036 (SCP-2 sterol transfer family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR043202 (Band-7 stomatin-like), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain), IPR003033 (SCP2 sterol-binding domain), IPR036527 (SCP2 sterol-binding domain superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00006761
Corresponding_transcriptF57H12.2.1
Corresponding_proteinCE52881
Corresponding_PCR_productcenix:228-b2
mv_AAB06496
sjj_F57H12.2
Corresponding_oligo_set (19)
Matching_cDNAL2_Nanopore_Roach_85082Inferred_automaticallytranscript_builder.pl
L1_Nanopore_Roach_85577Inferred_automaticallytranscript_builder.pl
male_Nanopore_Roach_45775
L1_Nanopore_Roach_40193
L2_Nanopore_Roach_41307
L1_Nanopore_Li_287558Inferred_automaticallytranscript_builder.pl
RNAi_result (12)
Microarray_results (20)
Brief_identificationBand 7 domain-containing proteinAccession_evidenceUniProtTR:Q7KPQ9
RNASeq_FPKM (74)
Last_reviewed03 Oct 2018 14:43:06WBPerson4025
Remark[181003 gw3] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4025
From_analysisRNASeq
Methodcurated