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WormBase Tree Display for CDS: F54D8.3b

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Name Class

F54D8.3bSMapS_parentSequenceF54D8
StructureSource_exons1155
497774
8211567
16291717
DB_infoDatabaseTrEMBLUniProtAccQ8IG19
UniProtUniProtAccQ8IG19
AlphaFoldentryQ8IG19
NCBI_proteinGI_numberGI:351059828
Protein_idCHROMOSOME_IIICCD674091
DB_remarkALH-1 protein; contains similarity to Pfam domain PF00171 (Aldehyde dehydrogenase family); contains similarity to Interpro domains IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR016161 (Aldehyde/histidinol dehydrogenase), IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR015590 (Aldehyde dehydrogenase domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBLBJ106750
Inferred_automaticallytranscript_builder
VisibleGeneWBGene00000107
Corresponding_transcriptF54D8.3b.1
F54D8.3b.2
Corresponding_proteinCE32434
Corresponding_PCR_productTH:301G5
cenix:301-g5
mv_G_YK53
sjj_F54D8.3
Corresponding_oligo_set (18)
Matching_cDNA (36)
RNAi_result (16)
Microarray_results (27)
Brief_identificationAldehyde dehydrogenase domain-containing proteinAccession_evidenceUniProtTR:Q8IG19
RNASeq_FPKM (74)
Remark[20021029 as] removed the first two exons (2037-2970) based on EST data (yk1088f02.5)Curator_confirmedWBPerson1850
Methodcurated