WormBase Tree Display for CDS: F54D8.3b
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F54D8.3b | SMap | S_parent | Sequence | F54D8 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 155 | |||
497 | 774 | |||||
821 | 1567 | |||||
1629 | 1717 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q8IG19 | ||
UniProt | UniProtAcc | Q8IG19 | ||||
AlphaFold | entry | Q8IG19 | ||||
NCBI_protein | GI_number | GI:351059828 | ||||
Protein_id | CHROMOSOME_III | CCD67409 | 1 | |||
DB_remark | ALH-1 protein; contains similarity to Pfam domain PF00171 (Aldehyde dehydrogenase family); contains similarity to Interpro domains IPR016162 (Aldehyde dehydrogenase, N-terminal), IPR016161 (Aldehyde/histidinol dehydrogenase), IPR016163 (Aldehyde dehydrogenase, C-terminal), IPR015590 (Aldehyde dehydrogenase domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ106750 | |||
Inferred_automatically | transcript_builder | |||||
Visible | Gene | WBGene00000107 | ||||
Corresponding_transcript | F54D8.3b.1 | |||||
F54D8.3b.2 | ||||||
Corresponding_protein | CE32434 | |||||
Corresponding_PCR_product | TH:301G5 | |||||
cenix:301-g5 | ||||||
mv_G_YK53 | ||||||
sjj_F54D8.3 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (36) | ||||||
RNAi_result (16) | ||||||
Microarray_results (27) | ||||||
Brief_identification | Aldehyde dehydrogenase domain-containing protein | Accession_evidence | UniProt | TR:Q8IG19 | ||
RNASeq_FPKM (74) | ||||||
Remark | [20021029 as] removed the first two exons (2037-2970) based on EST data (yk1088f02.5) | Curator_confirmed | WBPerson1850 | |||
Method | curated |