WormBase Tree Display for CDS: F49F1.1
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| F49F1.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F49F1 | |||
| Structure | Source_exons | 1 | 116 | |||
| 161 | 271 | |||||
| 327 | 425 | |||||
| 514 | 657 | |||||
| 704 | 934 | |||||
| 1186 | 1282 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9GZE5 | ||
| UniProt | UniProtAcc | Q9GZE5 | ||||
| UniProt_GCRP | UniProtAcc | Q9GZE5 | ||||
| AlphaFold | entry | Q9GZE5 | ||||
| NCBI_protein | GI_number | GI:373219264 | ||||
| TREEFAM | TREEFAM_ID | TF317956 | ||||
| Protein_id | CHROMOSOME_IV | CCD66745 | 1 | |||
| DB_remark | DRD-50 protein; contains similarity to Pfam domain PF01549 (ShK domain-like); contains similarity to Interpro domain IPR003582 (ShKT domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00018643 | ||||
| Corresponding_transcript | F49F1.1.1 | |||||
| Corresponding_protein | CE17084 | |||||
| Corresponding_PCR_product | cenix:21-e1 | |||||
| mv_F49F1.1 | ||||||
| sjj_F49F1.1 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (28) | ||||||
| RNAi_result | WBRNAi00078259 | |||||
| WBRNAi00015337 | ||||||
| WBRNAi00047876 | ||||||
| WBRNAi00032555 | ||||||
| WBRNAi00001965 | ||||||
| WBRNAi00095432 | ||||||
| WBRNAi00095424 | ||||||
| WBRNAi00095411 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | ShKT domain-containing protein | Accession_evidence | UniProt | TR:Q9GZE5 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 20 Sep 2013 00:00:00 | WBPerson4025 | ||||
| Method | curated |
