WormBase Tree Display for CDS: F46C5.3
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F46C5.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F46C5 | |||
Structure | Source_exons | 1 | 45 | |||
288 | 350 | |||||
475 | 556 | |||||
607 | 696 | |||||
864 | 967 | |||||
1014 | 1118 | |||||
1162 | 1259 | |||||
1305 | 1548 | |||||
1597 | 1850 | |||||
1897 | 2011 | |||||
DB_info | Database | KEGG | KEGG_id | 3.4.24.- | ||
SwissProt | UniProtAcc | Q20459 | ||||
UniProt | UniProtAcc | Q20459 | ||||
UniProt_GCRP | UniProtAcc | Q20459 | ||||
AlphaFold | entry | Q20459 | ||||
NCBI_protein | GI_number | GI:15718127 | ||||
Protein_id | CHROMOSOME_II | CAA91045 | 3 | |||
DB_remark | NAS-25 protein; contains similarity to Pfam domain PF01400 (Astacin (Peptidase family M12A)); contains similarity to Interpro domains IPR024079 (Metallopeptidase, catalytic domain superfamily), IPR017050 (Metallopeptidase, nematode), IPR001506 (Peptidase M12A), IPR006026 (Peptidase, metallopeptidase) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding (2) | |||||
Visible | Gene | WBGene00003544 | ||||
Corresponding_transcript | F46C5.3.1 | |||||
Corresponding_protein | CE28935 | |||||
Corresponding_PCR_product | cenix:205-h4 | |||||
mv_F46C5.3 | ||||||
sjj_F46C5.3 | ||||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA (11) | ||||||
RNAi_result | WBRNAi00089083 | |||||
WBRNAi00047507 | ||||||
WBRNAi00032355 | ||||||
WBRNAi00015076 | ||||||
Microarray_results (21) | ||||||
Brief_identification | Zinc metalloproteinase nas-25 | Accession_evidence | UniProt | SP:Q20459 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 28 Aug 2001 00:00:00 | WBPerson3103 | ||||
Remark | [010828 kj] Extended 5' end according to EST evidence. | |||||
[000127 dl] Prediction modified based on halfwise analysis | Curator_confirmed | WBPerson1846 | ||||
Method | curated |