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WormBase Tree Display for CDS: F35G12.6

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Name Class

F35G12.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF35G12
StructureSource_exons133
77241
286527
5741052
19742149
DB_infoDatabaseSwissProtUniProtAccQ20054
UniProtUniProtAccQ20054
UniProt_GCRPUniProtAccQ20054
AlphaFoldentryQ20054
NCBI_proteinGI_numberGI:25809227
TREEFAMTREEFAM_IDTF315012
Protein_idCHROMOSOME_IIICAA863302
DB_remarkMAB-21 protein; contains similarity to Pfam domains PF03281 (Mab-21 protein nucleotidyltransferase domain), PF20266 (Mab-21 protein HhH/H2TH-like domain); contains similarity to Interpro domains IPR046906 (Mab-21-like, HhH/H2TH-like domain), IPR046903 (Mab-21-like, nucleotidyltransferase domain), IPR024810 (Mab-21-like)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00003112
Corresponding_transcriptF35G12.6.1
Corresponding_proteinCE32651
Corresponding_PCR_productTH:300C4
WBPaper00025190:mab-21
cenix:220-a9
cenix:300-c4
mv_AAA97554
mv_F10F2.1
sjj_F35G12.6
Corresponding_oligo_set (19)
Matching_cDNA (34)
RNAi_result (26)
Microarray_results (20)
Brief_identificationProtein male abnormal 21Accession_evidenceUniProtSP:Q20054
RNASeq_FPKM (74)
Last_reviewed01 Jun 2001 00:00:00WBPerson3103
Remark[010601 kj] Changing the protein according to cDNA U19861 would result in severe truncation, as there's a frame shift in exon 3. Pseudogene?
Methodcurated