WormBase Tree Display for CDS: F35G12.6
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F35G12.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F35G12 | |||
Structure | Source_exons | 1 | 33 | |||
77 | 241 | |||||
286 | 527 | |||||
574 | 1052 | |||||
1974 | 2149 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20054 | ||
UniProt | UniProtAcc | Q20054 | ||||
UniProt_GCRP | UniProtAcc | Q20054 | ||||
AlphaFold | entry | Q20054 | ||||
NCBI_protein | GI_number | GI:25809227 | ||||
TREEFAM | TREEFAM_ID | TF315012 | ||||
Protein_id | CHROMOSOME_III | CAA86330 | 2 | |||
DB_remark | MAB-21 protein; contains similarity to Pfam domains PF03281 (Mab-21 protein nucleotidyltransferase domain), PF20266 (Mab-21 protein HhH/H2TH-like domain); contains similarity to Interpro domains IPR046906 (Mab-21-like, HhH/H2TH-like domain), IPR046903 (Mab-21-like, nucleotidyltransferase domain), IPR024810 (Mab-21-like) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00003112 | ||||
Corresponding_transcript | F35G12.6.1 | |||||
Corresponding_protein | CE32651 | |||||
Corresponding_PCR_product | TH:300C4 | |||||
WBPaper00025190:mab-21 | ||||||
cenix:220-a9 | ||||||
cenix:300-c4 | ||||||
mv_AAA97554 | ||||||
mv_F10F2.1 | ||||||
sjj_F35G12.6 | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA (34) | ||||||
RNAi_result (26) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Protein male abnormal 21 | Accession_evidence | UniProt | SP:Q20054 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 01 Jun 2001 00:00:00 | WBPerson3103 | ||||
Remark | [010601 kj] Changing the protein according to cDNA U19861 would result in severe truncation, as there's a frame shift in exon 3. Pseudogene? | |||||
Method | curated |