WormBase Tree Display for CDS: F32A5.5a
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F32A5.5a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F32A5 | |||
Structure | Source_exons | 1 | 21 | |||
1296 | 1412 | |||||
1464 | 1590 | |||||
1664 | 1801 | |||||
1847 | 2177 | |||||
2225 | 2405 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q19949 | ||
UniProt | UniProtAcc | Q19949 | ||||
UniProt_GCRP | UniProtAcc | Q19949 | ||||
AlphaFold | entry | Q19949 | ||||
NCBI_protein | GI_number | GI:351065123 | ||||
TREEFAM | TREEFAM_ID | TF313173 | ||||
Protein_id | CHROMOSOME_II | CCD66276 | 1 | |||
DB_remark | AQP-1 protein; contains similarity to Pfam domain PF00230 (Major intrinsic protein); contains similarity to Interpro domains IPR023271 (Aquaporin-like), IPR000425 (Major intrinsic protein) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ110077 | |||
Visible | Gene | WBGene00000169 | ||||
Corresponding_transcript | F32A5.5a.1 | |||||
Corresponding_protein | CE29304 | |||||
Corresponding_PCR_product | cenix:210-g3 | |||||
mv_F32A5.5 | ||||||
sjj_F32A5.5 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (49) | ||||||
RNAi_result | WBRNAi00097044 | |||||
WBRNAi00094564 | ||||||
WBRNAi00014195 | ||||||
WBRNAi00063161 | ||||||
WBRNAi00031645 | ||||||
WBRNAi00046077 | ||||||
WBRNAi00097048 | ||||||
WBRNAi00094561 | ||||||
Microarray_results (23) | ||||||
Brief_identification | Aquaporin | Accession_evidence | UniProt | TR:Q19949 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 05 Nov 2002 00:00:00 | WBPerson1867 | ||||
Remark | [010910 js] added the first exon based on EST data - | Curator_confirmed | WBPerson615 | |||
Method | curated |