WormBase Tree Display for CDS: F22D3.2c
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| F22D3.2c | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F22D3 | |||
| Structure | Source_exons | 1 | 195 | |||
| 378 | 488 | |||||
| 1769 | 1890 | |||||
| 2071 | 2437 | |||||
| 2485 | 2586 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q5DX40 | ||
| UniProt | UniProtAcc | Q5DX40 | ||||
| AlphaFold | entry | Q5DX40 | ||||
| NCBI_protein | GI_number | GI:373218562 | ||||
| Protein_id | CHROMOSOME_II | CCD61548 | 1 | |||
| DB_remark | FLCN-1 protein; contains similarity to Pfam domain PF16692 (Folliculin C-terminal domain); contains similarity to Interpro domains IPR044886 (Folliculin, DENN domain, C-terminal superfamily), IPR032035 (Folliculin, DENN domain), IPR021713 (Folliculin) | |||||
| Origin (2) | ||||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Accession_evidence | EMBL | BJ111346 | |||
| Visible | Gene | WBGene00017699 | ||||
| Corresponding_transcript | F22D3.2c.1 | |||||
| Corresponding_protein | CE37762 | |||||
| Corresponding_PCR_product | mv_F22D3.2.v5 | |||||
| sjj_F22D3.2 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (28) | ||||||
| RNAi_result | WBRNAi00013747 | |||||
| WBRNAi00031265 | ||||||
| WBRNAi00092437 | ||||||
| WBRNAi00092428 | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Folliculin DENN domain-containing protein | Accession_evidence | UniProt | TR:Q5DX40 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 26 May 2016 17:13:21 | WBPerson1983 | ||||
| Remark | [20041101 po] This isofrom is based on EST data and is actually two different isoforms that differ in their 5' UTR(yk1142b04.5/yk1327b04.5) | Curator_confirmed | WBPerson1867 | |||
| Associated_feature | WBsf003586 | |||||
| Method | curated |
