WormBase Tree Display for CDS: C55A6.5
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| C55A6.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C55A6 | |||
| Structure | Source_exons (4) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P90780 | ||
| UniProt | UniProtAcc | P90780 | ||||
| UniProt_GCRP | UniProtAcc | P90780 | ||||
| AlphaFold | entry | P90780 | ||||
| NCBI_protein | GI_number | GI:3875276 | ||||
| TREEFAM | TREEFAM_ID | TF314888 | ||||
| Protein_id | CHROMOSOME_V | CAB02865 | 1 | |||
| DB_remark | SDZ-8 protein; contains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00008334 | ||||
| Corresponding_transcript | C55A6.5.1 | |||||
| Corresponding_protein | CE09002 | |||||
| Corresponding_PCR_product | cenix:182-g11 | |||||
| mv_C55A6.5 | ||||||
| sjj_C55A6.5 | ||||||
| Corresponding_oligo_set (12) | ||||||
| Matching_cDNA (21) | ||||||
| RNAi_result | WBRNAi00043213 | |||||
| WBRNAi00113327 | ||||||
| WBRNAi00030173 | ||||||
| WBRNAi00012431 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | C-factor | Accession_evidence | UniProt | TR:P90780 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | [970122 dl] Pfam signature for alcohol dehydrogenase (PF00106) | Curator_confirmed | WBPerson1846 | |||
| Associated_feature | WBsf129998 | |||||
| Method | curated |
