WormBase Tree Display for Gene: WBGene00008334
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| WBGene00008334 | SMap | S_parent | Sequence | C55A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sdz-8 | Paper_evidence | WBPaper00024645 | |||||
| Person_evidence | WBPerson374 | ||||||||
| Sequence_name | C55A6.5 | ||||||||
| Molecular_name | C55A6.5 | ||||||||
| C55A6.5.1 | |||||||||
| CE09002 | |||||||||
| Other_name | CELE_C55A6.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | sdz-8 | ||||||||
| DB_info | Database | AceView | gene | 5L996 | |||||
| WormQTL | gene | WBGene00008334 | |||||||
| WormFlux | gene | WBGene00008334 | |||||||
| NDB | locus_tag | CELE_C55A6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008334|UniProtKB=P90780 | |||||||
| family | PTHR43544 | ||||||||
| NCBI | gene | 183834 | |||||||
| RefSeq | protein | NM_073520.4 | |||||||
| TREEFAM | TREEFAM_ID | TF314888 | |||||||
| TrEMBL | UniProtAcc | P90780 | |||||||
| UniProt_GCRP | UniProtAcc | P90780 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sdz | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049031 | ||||||||
| 00049032 | |||||||||
| Contained_in_operon | CEOP5555 | ||||||||
| CEOP548 | |||||||||
| Ortholog (83) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in cytoplasm. Is an ortholog of human CBR3 (carbonyl reductase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55A6.5 | |||||||
| Corresponding_transcript | C55A6.5.1 | ||||||||
| Other_sequence | PPC12977_1 | ||||||||
| CBC09916_1 | |||||||||
| Dviv_isotig26360 | |||||||||
| CJC03294_1 | |||||||||
| CRC04518_1 | |||||||||
| PPC08719_1 | |||||||||
| CJC00300_1 | |||||||||
| CR00427 | |||||||||
| Acan_isotig12231 | |||||||||
| Associated_feature | WBsf653123 | ||||||||
| WBsf653124 | |||||||||
| WBsf234547 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043213 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00113327 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030173 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012431 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012651 | ||||||||
| Expr1033609 | |||||||||
| Expr1147194 | |||||||||
| Expr2015701 | |||||||||
| Expr2033933 | |||||||||
| Drives_construct | WBCnstr00033045 | ||||||||
| Construct_product | WBCnstr00033045 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction (40) | |||||||||
| Map_info | Map | V | Position | 3.1848 | Error | 0.003228 | |||
| Positive | Positive_clone | C55A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029387 | ||||||||
| Picture | WBPicture0000013093 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
