WormBase Tree Display for CDS: C05C8.7
expand all nodes | collapse all nodes | view schema
| C05C8.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C05C8 | |||
| Structure | Source_exons (6) | |||||
| DB_info | Database | KEGG | KEGG_id | 5.3.1.8 | ||
| TrEMBL | UniProtAcc | O16315 | ||||
| UniProt | UniProtAcc | O16315 | ||||
| UniProt_GCRP | UniProtAcc | O16315 | ||||
| AlphaFold | entry | O16315 | ||||
| NCBI_protein | GI_number | GI:351021080 | ||||
| TREEFAM | TREEFAM_ID | TF312831 | ||||
| Protein_id | CHROMOSOME_V | CCD63093 | 1 | |||
| DB_remark | contains similarity to Pfam domains PF20511 (Phosphomannose isomerase type I, catalytic domain), PF20512 (Phosphomannose isomerase type I, helical insertion domain); contains similarity to Interpro domains IPR046458 (Phosphomannose isomerase type I, helical insertion domain), IPR016305 (Mannose-6-phosphate isomerase), IPR011051 (RmlC-like cupin domain superfamily), IPR001250 (Mannose-6-phosphate isomerase, type I), IPR046457 (Phosphomannose isomerase type I, catalytic domain), IPR014710 (RmlC-like jelly roll fold) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015464 | ||||
| Corresponding_transcript | C05C8.7.1 | |||||
| Corresponding_protein | CE07925 | |||||
| Corresponding_PCR_product | cenix:12-c3 | |||||
| mv_C05C8.7 | ||||||
| sjj_C05C8.7 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (117) | ||||||
| RNAi_result (11) | ||||||
| Microarray_results (22) | ||||||
| Brief_identification | mannose-6-phosphate isomerase | Accession_evidence | UniProt | TR:O16315 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | SL1 trans-spliced; see yk1011d08.5 | |||||
| Associated_feature | WBsf000572 | |||||
| WBsf014744 | ||||||
| WBsf015683 | ||||||
| Method | curated |
