WormBase Tree Display for CDS: C34D4.14a
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C34D4.14a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | C34D4 | ||
Structure | Source_exons | 1 | 358 | ||
405 | 649 | ||||
719 | 1210 | ||||
1256 | 1420 | ||||
1593 | 1743 | ||||
1789 | 2447 | ||||
2526 | 2909 | ||||
3087 | 3224 | ||||
3340 | 3453 | ||||
3504 | 3764 | ||||
3812 | 5254 | ||||
5310 | 5477 | ||||
5545 | 5656 | ||||
6063 | 6926 | ||||
7009 | 7952 | ||||
8002 | 8432 | ||||
8490 | 8912 | ||||
8959 | 9103 | ||||
9158 | 9425 | ||||
9472 | 9545 | ||||
9601 | 9708 | ||||
DB_info | Database | KEGG | KEGG_id | 2.3.2.26 | |
SwissProt | UniProtAcc | V6CLA2 | |||
UniProt | UniProtAcc | V6CLA2 | |||
UniProt_GCRP | UniProtAcc | V6CLA2 | |||
AlphaFold | entry | V6CLA2 | |||
NCBI_protein | GI_number | GI:563403464 | |||
Protein_id | CHROMOSOME_IV | CDK13339 | 1 | ||
DB_remark | HECD-1 protein; contains similarity to Pfam domains PF00632 (HECT-domain (ubiquitin-transferase)), PF06701 (Mib_herc2), PF07738 (Sad1 / UNC-like C-terminal), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR012919 (SUN domain), IPR011989 (Armadillo-like helical), IPR045322 (E3 ubiquitin-protein ligase HECTD1/TRIP12-like), IPR000569 (HECT domain), IPR008979 (Galactose-binding-like domain superfamily), IPR002110 (Ankyrin repeat), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR010606 (Mib-herc2), IPR035983 (HECT, E3 ligase catalytic domain), IPR016024 (Armadillo-type fold), IPR037252 (Mib/herc2 domain superfamily) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible (12) | |||||
Associated_feature | WBsf128115 | ||||
Method | curated |