WormBase Tree Display for CDS: T20G5.1

T20G5.1 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: T20G5
  Structure: Source_exons: 1 123
      171 291
      343 707
      754 933
      1042 1902
      1947 2249
      2297 3451
      3498 4719
      4772 5350
      5399 5535
  DB_info: Database: SwissProt UniProtAcc P34574
      UniProt UniProtAcc P34574
      UniProt_GCRP UniProtAcc P34574
      AlphaFold entry P34574
      NCBI_protein GI_number GI:458481
      TREEFAM TREEFAM_ID TF300059
    Protein_id: CHROMOSOME_III CAA83003 1
    DB_remark: CHC-1 protein; contains similarity to Pfam domains PF00637 (Region in Clathrin and VPS), PF01394 (Clathrin propeller repeat), PF09268 (Clathrin, heavy-chain linker), PF13838 (Clathrin-H-link); contains similarity to Interpro domains IPR016341 (Clathrin, heavy chain), IPR016025 (Clathrin heavy chain, N-terminal), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR015348 (Clathrin, heavy chain, linker, core motif), IPR000547 (Clathrin, heavy chain/VPS, 7-fold repeat), IPR022365 (Clathrin, heavy chain, propeller repeat), IPR016024 (Armadillo-type fold)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00011867
    Corresponding_transcript: T20G5.1.1
    Corresponding_protein: CE00480
    Corresponding_PCR_product: TH:321e5
      cenix:321-e5
      mv_T20G5.1
      sjj_T20G5.1
    Corresponding_oligo_set (14)
    Matching_cDNA (127)
    RNAi_result: WBRNAi00098763
      WBRNAi00090886
      WBRNAi00098561
      WBRNAi00078136
      WBRNAi00098522
      WBRNAi00098769
      WBRNAi00098766
      WBRNAi00092792
      WBRNAi00098563
      WBRNAi00071357
      WBRNAi00098772
      WBRNAi00082016
      WBRNAi00098776
      WBRNAi00098550
      WBRNAi00098482
      WBRNAi00098519
      WBRNAi00071863
      WBRNAi00098559
      WBRNAi00098573
      WBRNAi00098536
      WBRNAi00098540
      WBRNAi00098767
      WBRNAi00098480
      WBRNAi00082017
      WBRNAi00098765
      WBRNAi00098513
      WBRNAi00009192
      WBRNAi00087736
      WBRNAi00098538
      WBRNAi00098532
      WBRNAi00106546
      WBRNAi00082015
      WBRNAi00082018
      WBRNAi00075617
      WBRNAi00002600
      WBRNAi00098774
      WBRNAi00092773
      WBRNAi00110565
      WBRNAi00098577
      WBRNAi00077469
      WBRNAi00098544
      WBRNAi00080533
      WBRNAi00083351
      WBRNAi00098516
      WBRNAi00026333
      WBRNAi00098576
      WBRNAi00053656
      WBRNAi00085390
      WBRNAi00098761
      WBRNAi00110550
      WBRNAi00082938
      WBRNAi00114587
      WBRNAi00022632
      WBRNAi00098574
      WBRNAi00098764
      WBRNAi00103122
      WBRNAi00077455
      WBRNAi00087738
      WBRNAi00098762
      WBRNAi00098548
      WBRNAi00098510
      WBRNAi00098552
      WBRNAi00075614
      WBRNAi00098530
      WBRNAi00098575
      WBRNAi00098546
      WBRNAi00098475
      WBRNAi00098768
    Microarray_results (15)
    Brief_identification: Probable clathrin heavy chain 1 Accession_evidence: UniProt SP:P34574
    RNASeq_FPKM (74)
  Associated_feature: WBsf027620
  Method: curated