WormBase Tree Display for CDS: T20G5.13
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| T20G5.13 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T20G5 | |||
| Structure | Source_exons | 1 | 96 | |||
| 268 | 570 | |||||
| 1119 | 1433 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q8T3C6 | ||
| UniProt | UniProtAcc | Q8T3C6 | ||||
| UniProt_GCRP | UniProtAcc | Q8T3C6 | ||||
| AlphaFold | entry | Q8T3C6 | ||||
| NCBI_protein | GI_number | GI:19171241 | ||||
| TREEFAM | TREEFAM_ID | TF315483 | ||||
| Protein_id | CHROMOSOME_III | CAD27184 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01682 (DB module); contains similarity to Interpro domain IPR002602 (Domain of unknown function DB) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011874 | ||||
| Corresponding_transcript | T20G5.13.1 | |||||
| Corresponding_protein | CE30303 | |||||
| Corresponding_PCR_product | TH:323A4 | |||||
| cenix:223-d1 | ||||||
| cenix:323-a4 | ||||||
| sjj_T20G5.8 | ||||||
| smd_T20G5.12 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | L1_Nanopore_Li_202370 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00053659 | |||||
| WBRNAi00018932 | ||||||
| WBRNAi00063171 | ||||||
| WBRNAi00053661 | ||||||
| WBRNAi00063170 | ||||||
| WBRNAi00006184 | ||||||
| Microarray_results | SMD_T20G5.12 | |||||
| SMD_T20G5.8 | ||||||
| A_12_P100544 | ||||||
| GPL13394_WBGene00011874 | ||||||
| GPL13914_T20G5.13 | ||||||
| GPL14144_T20G5.13_452-511_0.954_2_B | ||||||
| GPL14144_T20G5.13_489-548_0.948_3_C | ||||||
| GPL14144_T20G5.13_580-639_0.958_1_A | ||||||
| GPL19516_CGZ0035756 | ||||||
| GPL21109_T20G5.13 | ||||||
| GPL3518_CE30303 | ||||||
| GPL8304_CE_WBGene00011874_A | ||||||
| GPL8673_T20G5_13P00019 | ||||||
| GPL8673_T20G5_13P00435 | ||||||
| GPL8673_T20G5_13P00583 | ||||||
| GPL9450_T20G5.13 | ||||||
| cea2.i.20891 | ||||||
| Brief_identification | Domain of unknown function DB domain-containing protein | Accession_evidence | UniProt | TR:Q8T3C6 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
