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WormBase Tree Display for CDS: K05F1.2

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Name Class

K05F1.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceK05F1
StructureSource_exons1384
DB_infoDatabaseSwissProtUniProtAccP53017
UniProtUniProtAccP53017
UniProt_GCRPUniProtAccP53017
AlphaFoldentryP53017
NCBI_proteinGI_numberGI:373219627
Protein_idCHROMOSOME_IICCD691421
DB_remarkMSP-142 protein; contains similarity to Pfam domain PF00635 (MSP (Major sperm protein) domain); contains similarity to Interpro domains IPR000535 (Major sperm protein (MSP) domain), IPR008962 (PapD-like superfamily), IPR013783 (Immunoglobulin-like fold)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00003469
Corresponding_transcriptK05F1.2.1
Corresponding_proteinCE02806
Corresponding_PCR_productcenix:206-e1
mv_K05F1.2
sjj_K05F1.2
Corresponding_oligo_set (14)
Matching_cDNAmale_Nanopore_Roach_48863
male_Nanopore_Roach_53128
male_Nanopore_Roach_111564
male_Nanopore_Roach_157497
young_adult_Nanopore_Roach_30554
young_adult_Nanopore_Roach_54437
young_adult_Nanopore_Roach_131151
L4_Nanopore_Roach_67981
adult_Nanopore_Roach_108466
male_Nanopore_Roach_48430
RNAi_resultWBRNAi00033989
WBRNAi00049989
WBRNAi00059194
WBRNAi00021849
WBRNAi00059192
Microarray_resultsSMD_K05F1.2
A_12_P116101
Aff_K05F1.2
GPL14144_K05F1.2_41-100_0.943_1_A
GPL19516_CGZ0027933
GPL19516_CGZ0056364
GPL21109_K05F1.2
GPL21109_ZK1248.6
GPL8304_CE_WBGene00003469_A
GPL8673_K05F1_2P00025
GPL8673_K05F1_2P00073
GPL8673_K05F1_2P00325
GPL9450_K05F1.2
cea2.d.32309
cea2.d.32310
Brief_identificationMajor sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142Accession_evidenceUniProtSP:P53017
RNASeq_FPKM (74)
Methodcurated