WormBase Tree Display for CDS: F32G8.6
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| F32G8.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F32G8 | |||
| Structure | Source_exons | 1 | 163 | |||
| 731 | 826 | |||||
| 874 | 1071 | |||||
| 1130 | 1344 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.5.4.16 | ||
| SwissProt | UniProtAcc | Q19980 | ||||
| UniProt | UniProtAcc | Q19980 | ||||
| UniProt_GCRP | UniProtAcc | Q19980 | ||||
| AlphaFold | entry | Q19980 | ||||
| NCBI_protein | GI_number | GI:3876608 | ||||
| TREEFAM | TREEFAM_ID | TF105616 | ||||
| Protein_id | CHROMOSOME_V | CAA96650 | 1 | |||
| DB_remark | CAT-4 protein; contains similarity to Pfam domain PF01227 (GTP cyclohydrolase I); contains similarity to Interpro domains IPR020602 (GTP cyclohydrolase I domain), IPR043134 (GTP cyclohydrolase I, N-terminal domain), IPR001474 (GTP cyclohydrolase I), IPR043133 (GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000298 | ||||
| Corresponding_transcript | F32G8.6.1 | |||||
| Corresponding_protein | CE05795 | |||||
| Corresponding_PCR_product | cenix:78-g12 | |||||
| mv_F32G8.6 | ||||||
| sjj_F32G8.6 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA | male_Nanopore_Roach_109576 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_1936 | ||||||
| young_adult_Nanopore_Roach_2335 | ||||||
| young_adult_Nanopore_Roach_21659 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_52195 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_88202 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_22081 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_29859 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_12318 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_1633 | ||||||
| L2_Nanopore_Roach_69681 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_18442 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_1588 | ||||||
| L1_Nanopore_Roach_18557 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_61400 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_1917 | ||||||
| L3_Nanopore_Roach_27895 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_19204 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_18799 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_1391 | ||||||
| elegans_PE_SS_GG5624|c0_g2_i1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_36295 | Inferred_automatically | transcript_builder.pl | ||||
| CK575142 | Inferred_automatically | transcript_builder.pl | ||||
| CB102444 | Inferred_automatically | transcript_builder.pl | ||||
| CB102379 | Inferred_automatically | transcript_builder.pl | ||||
| CB102437 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF034C1_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_268520 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_267239 | Inferred_automatically | transcript_builder.pl | ||||
| CB102443 | Inferred_automatically | transcript_builder.pl | ||||
| CB102404 | Inferred_automatically | transcript_builder.pl | ||||
| CB102490 | Inferred_automatically | transcript_builder.pl | ||||
| CB102384 | Inferred_automatically | transcript_builder.pl | ||||
| CB102392 | Inferred_automatically | transcript_builder.pl | ||||
| FN894064 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_294206 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_17826 | Inferred_automatically | transcript_builder.pl | ||||
| CB102414 | Inferred_automatically | transcript_builder.pl | ||||
| CK575141 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_21667 | Inferred_automatically | transcript_builder.pl | ||||
| CB102381 | Inferred_automatically | transcript_builder.pl | ||||
| CK575152 | Inferred_automatically | transcript_builder.pl | ||||
| CK575140 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_294709 | Inferred_automatically | transcript_builder.pl | ||||
| FN881283 | Inferred_automatically | transcript_builder.pl | ||||
| CB102395 | Inferred_automatically | transcript_builder.pl | ||||
| KP290890 | Inferred_automatically | transcript_builder.pl | ||||
| CB102390 | Inferred_automatically | transcript_builder.pl | ||||
| CB102406 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_37187 | Inferred_automatically | transcript_builder.pl | ||||
| CK575144 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_255689 | Inferred_automatically | transcript_builder.pl | ||||
| CK575157 | Inferred_automatically | transcript_builder.pl | ||||
| CB102431 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_19895 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00031695 | |||||
| WBRNAi00115602 | ||||||
| WBRNAi00014232 | ||||||
| WBRNAi00115714 | ||||||
| WBRNAi00046157 | ||||||
| WBRNAi00115603 | ||||||
| WBRNAi00115701 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | GTP cyclohydrolase 1 | Accession_evidence | UniProt | SP:Q19980 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf021721 | |||||
| Method | curated |
