WormBase Tree Display for CDS: C07D8.6
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| C07D8.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C07D8 | |||
| Structure | Source_exons | 1 | 243 | |||
| 295 | 704 | |||||
| 752 | 1006 | |||||
| 1060 | 1105 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P91020 | ||
| UniProt | UniProtAcc | P91020 | ||||
| UniProt_GCRP | UniProtAcc | P91020 | ||||
| AlphaFold | entry | P91020 | ||||
| NCBI_protein | GI_number | GI:373253904 | ||||
| Protein_id | CHROMOSOME_X | CCD63508 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00248 (Aldo/keto reductase family); contains similarity to Interpro domains IPR036812 (NADP-dependent oxidoreductase domain superfamily), IPR020471 (Aldo-keto reductase), IPR023210 (NADP-dependent oxidoreductase domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015565 | ||||
| Corresponding_transcript | C07D8.6.1 | |||||
| Corresponding_protein | CE06776 | |||||
| Corresponding_PCR_product | cenix:22-h3 | |||||
| mv_C07D8.6 | ||||||
| sjj_C07D8.6 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA | male_Nanopore_Roach_131055 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_148745 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_3265 | ||||||
| young_adult_Nanopore_Roach_23768 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_26213 | ||||||
| young_adult_Nanopore_Roach_43157 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_110292 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_122009 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_10438 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_15658 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_57014 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_18753 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_20846 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_21942 | ||||||
| L2_Nanopore_Roach_87357 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_105977 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_20256 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_16504 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_15414 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_42301 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_22092 | ||||||
| L3_Nanopore_Roach_20343 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_102736 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_90817 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_101684 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_24020 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_20262 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_13439 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_82645 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_36095 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_87997 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_16157 | Inferred_automatically | transcript_builder.pl | ||||
| yk1393d06.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk641g1.3 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4659|c4_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| yk538b3.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk511g10.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_225762 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_219989 | Inferred_automatically | transcript_builder.pl | ||||
| EC002716 | Inferred_automatically | transcript_builder.pl | ||||
| yk175b4.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_241495 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR011D4_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_262640 | Inferred_automatically | transcript_builder.pl | ||||
| EB996743 | Inferred_automatically | transcript_builder.pl | ||||
| yk1078d05.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1233a01.5 | Inferred_automatically | transcript_builder.pl | ||||
| EC025595 | Inferred_automatically | transcript_builder.pl | ||||
| yk511g10.3 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_125133 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR011D4_2 | Inferred_automatically | transcript_builder.pl | ||||
| yk514f5.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk290a6.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_13597 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_366044 | Inferred_automatically | transcript_builder.pl | ||||
| yk465b6.3 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF011D4_1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_318202 | Inferred_automatically | transcript_builder.pl | ||||
| yk609e5.3 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_161309 | Inferred_automatically | transcript_builder.pl | ||||
| yk1525h09.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_362363 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_249378 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_218018 | Inferred_automatically | transcript_builder.pl | ||||
| yk327a3.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_132058 | Inferred_automatically | transcript_builder.pl | ||||
| yk518d5.3 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_198289 | Inferred_automatically | transcript_builder.pl | ||||
| yk1525h09.3 | Inferred_automatically | transcript_builder.pl | ||||
| EC009001 | Inferred_automatically | transcript_builder.pl | ||||
| yk1393d06.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_153173 | Inferred_automatically | transcript_builder.pl | ||||
| yk450h1.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1078d05.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_351743 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00092615 | |||||
| WBRNAi00010387 | ||||||
| WBRNAi00039997 | ||||||
| WBRNAi00061370 | ||||||
| WBRNAi00028628 | ||||||
| WBRNAi00007927 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | NADP-dependent oxidoreductase domain-containing protein | Accession_evidence | UniProt | TR:P91020 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf001990 | |||||
| Method | curated |
