WormBase Tree Display for CDS: ZK617.1h
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| ZK617.1h | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_IV | |||
| Structure | Source_exons (34) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A061AE24 | ||
| UniProt | UniProtAcc | A0A061AE24 | ||||
| AlphaFold | entry | A0A061AE24 | ||||
| NCBI_protein | GI_number | GI:646227130 | ||||
| Protein_id | CHROMOSOME_IV | CDR32744 | 1 | |||
| DB_remark | UNC-22 protein; contains similarity to Pfam domains PF00041 (Fibronectin type III domain), PF00069 (Protein kinase domain), PF07679 (Immunoglobulin I-set domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR003599 (Immunoglobulin subtype), IPR003598 (Immunoglobulin subtype 2), IPR003961 (Fibronectin type III), IPR013098 (Immunoglobulin I-set), IPR013783 (Immunoglobulin-like fold), IPR000719 (Protein kinase domain), IPR036179 (Immunoglobulin-like domain superfamily), IPR036116 (Fibronectin type III superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Curator_confirmed | WBPerson4025 | ||||
| Visible | Gene | WBGene00006759 | ||||
| Corresponding_transcript | ZK617.1h.1 | |||||
| Corresponding_protein | CE49973 | |||||
| Corresponding_PCR_product | cenix:155-g4 | |||||
| mv_CAA33463 | ||||||
| sjj_ZK617.1 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | male_Nanopore_Roach_52723 | |||||
| male_Nanopore_Roach_148882 | ||||||
| young_adult_Nanopore_Roach_611 | ||||||
| young_adult_Nanopore_Roach_47828 | ||||||
| young_adult_Nanopore_Roach_54022 | ||||||
| young_adult_Nanopore_Roach_122157 | ||||||
| L3_Nanopore_Roach_91376 | ||||||
| L2_Nanopore_Roach_80162 | ||||||
| L3_Nanopore_Roach_44924 | ||||||
| L2_Nanopore_Roach_65405 | ||||||
| L1_Nanopore_Roach_47852 | ||||||
| L2_Nanopore_Roach_47227 | ||||||
| adult_Nanopore_Roach_25195 | ||||||
| L1_Nanopore_Roach_97094 | ||||||
| L3_Nanopore_Roach_15413 | ||||||
| elegans_PE_SS_GG4012|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4012|c3_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result (41) | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Twitchin | Accession_evidence | UniProt | SP:Q23551 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 23 Apr 2014 00:00:00 | WBPerson4025 | ||||
| Remark | [140423 gw3] Created this isoform based on the RNASeq splice data. | Curator_confirmed | WBPerson4025 | |||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Method | curated |
