WormBase Tree Display for CDS: F46E10.8
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| F46E10.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F46E10 | |||
| Structure | Source_exons | 1 | 51 | |||
| 122 | 238 | |||||
| 292 | 363 | |||||
| 413 | 485 | |||||
| 931 | 1008 | |||||
| 1054 | 1173 | |||||
| 1220 | 1359 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.4.19.12 | ||
| TrEMBL | UniProtAcc | Q9UAV3 | ||||
| UniProt | UniProtAcc | Q9UAV3 | ||||
| UniProt_GCRP | UniProtAcc | Q9UAV3 | ||||
| AlphaFold | entry | Q9UAV3 | ||||
| NCBI_protein | GI_number | GI:351063228 | ||||
| TREEFAM | TREEFAM_ID | TF316166 | ||||
| Protein_id | CHROMOSOME_V | CCD71314 | 1 | |||
| DB_remark | UBH-1 protein; contains similarity to Pfam domain PF01088 (Ubiquitin carboxyl-terminal hydrolase, family 1); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR036959 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily), IPR001578 (Peptidase C12, ubiquitin carboxyl-terminal hydrolase) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00006721 | ||||
| Corresponding_transcript | F46E10.8.1 | |||||
| Corresponding_protein | CE20818 | |||||
| Corresponding_PCR_product | cenix:162-g4 | |||||
| mv_F46E10.f | ||||||
| sjj_F46E10.8 | ||||||
| Corresponding_oligo_set | 193040_s_at | |||||
| A_12_P114745 | ||||||
| GPL13394_WBGene00006721 | ||||||
| GPL13914_F46E10.8 | ||||||
| GPL14144_F46E10.8_109-168_0.921_2_A | ||||||
| GPL14144_F46E10.8_250-309_0.834_17_B | ||||||
| GPL14144_F46E10.8_606-665_0.930_1_C | ||||||
| GPL3518_CE20818 | ||||||
| GPL8304_CE_WBGene00006721_A | ||||||
| GPL8673_F46E10_8P00105 | ||||||
| GPL8673_F46E10_8P00402 | ||||||
| GPL8673_F46E10_8P00550 | ||||||
| GPL9450_F46E10.8 | ||||||
| cea2.c.36425 | ||||||
| Matching_cDNA (43) | ||||||
| RNAi_result | WBRNAi00102982 | |||||
| WBRNAi00102992 | ||||||
| WBRNAi00102972 | ||||||
| WBRNAi00015095 | ||||||
| WBRNAi00094630 | ||||||
| WBRNAi00047527 | ||||||
| WBRNAi00076438 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Ubiquitin carboxyl-terminal hydrolase | Accession_evidence | UniProt | TR:Q9UAV3 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf015904 | |||||
| Method | curated |
