WormBase Tree Display for CDS: B0228.5b
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B0228.5b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | B0228 | |||
Structure | Source_exons | 1 | 42 | |||
96 | 257 | |||||
529 | 600 | |||||
655 | 723 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q09433 | ||
UniProtIsoformAcc | Q09433-2 | |||||
UniProt | UniProtAcc | Q09433 | ||||
UniProt_GCRP | UniProtAcc | Q09433 | ||||
AlphaFold | entry | Q09433 | ||||
NCBI_protein | GI_number | GI:351065477 | ||||
Protein_id | CHROMOSOME_II | CCD61449 | 1 | |||
DB_remark | TRX-1 protein; contains similarity to Pfam domain PF00085 (Thioredoxin); contains similarity to Interpro domains IPR036249 (Thioredoxin-like superfamily), IPR013766 (Thioredoxin domain), IPR005746 (Thioredoxin) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | CB389161 | |||
Visible | Gene | WBGene00015062 | ||||
Corresponding_transcript | B0228.5b.1 | |||||
Corresponding_protein | CE34629 | |||||
Corresponding_PCR_product | cenix:207-f10 | |||||
mv_B0228.5 | ||||||
mv_B0228.c | ||||||
sjj_B0228.5 | ||||||
Corresponding_oligo_set | 189557_at | |||||
A_12_P159710 | ||||||
A_12_P159711 | ||||||
A_12_P159712 | ||||||
Aff_B0228.5 | ||||||
GPL13394_WBGene00015062 | ||||||
GPL13914_B0228.5 | ||||||
GPL14144_B0228.5a_219-278_0.922_5_B | ||||||
GPL14144_B0228.5a_295-354_0.874_13_C | ||||||
GPL14144_B0228.5a_56-115_0.950_1_A | ||||||
GPL3518_CE01745 | ||||||
GPL8304_CE_WBGene00015062_A | ||||||
GPL8673_B0228_5aP00005 | ||||||
GPL8673_B0228_5aP00093 | ||||||
GPL8673_B0228_5aP00259 | ||||||
GPL8673_B0228_5bP00001 | ||||||
GPL8673_B0228_5bP00004 | ||||||
GPL8673_B0228_5bP00257 | ||||||
GPL9450_B0228.5 | ||||||
cea2.i.08107 | ||||||
Matching_cDNA | L3_Nanopore_Roach_36532 | Inferred_automatically | transcript_builder.pl | |||
L1_Nanopore_Li_53229 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Li_218749 | Inferred_automatically | transcript_builder.pl | ||||
DQ241300 | Inferred_automatically | transcript_builder.pl | ||||
OSTF113E11_1 | Inferred_automatically | transcript_builder.pl | ||||
OSTR113E11_1 | Inferred_automatically | transcript_builder.pl | ||||
EM_Nanopore_Li_250235 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00009608 | |||||
WBRNAi00065061 | ||||||
WBRNAi00108374 | ||||||
WBRNAi00065059 | ||||||
WBRNAi00065060 | ||||||
WBRNAi00028012 | ||||||
WBRNAi00038765 | ||||||
Microarray_results (21) | ||||||
Brief_identification | Thioredoxin-1 | Accession_evidence | UniProt | SP:Q09433 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |