WormBase Tree Display for Sequence: cTel55X
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| cTel55X | DNA | cTel55X | 4059 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00007068 | 78 | 3843 | |
| CDS_child (38) | ||||||
| Transcript | cTel55X.1a.1 | 85 | 3837 | |||
| cTel55X.1b.1 | 78 | 3843 | ||||
| Nongenomic | yk345c8 | 2103 | 3772 | |||
| PCR_product | cenix:128-c8 | 1839 | 2916 | |||
| mv_6R55.1 | 86 | 3736 | ||||
| sjj_6R55.1 | 2035 | 3585 | ||||
| Allele (45) | ||||||
| Feature_object (21) | ||||||
| Feature_data | cTel55X:Polysome | 1 | 4059 | |||
| cTel55X:TranscriptionallyActiveRegion | 1 | 4059 | ||||
| cTel55X:ChIPSeqTF | 1 | 4059 | ||||
| cTel55X:TRF | 1 | 4059 | ||||
| cTel55X:Dust | 1 | 4059 | ||||
| cTel55X:inverted | 1 | 4059 | ||||
| Homol_data | cTel55X:RNAi | 1 | 4059 | |||
| cTel55X:SAGE | 1 | 4059 | ||||
| cTel55X:Mass-spec | 1 | 4059 | ||||
| cTel55X:TEC_RED | 1 | 4059 | ||||
| cTel55X:wublastx_briggsae | 1 | 4059 | ||||
| cTel55X:wublastx_brugia | 1 | 4059 | ||||
| cTel55X:wublastx_remanei | 1 | 4059 | ||||
| cTel55X:RepeatMasker | 1 | 4059 | ||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_left | 6R55 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080089 | ||
| NDB_ID | _AC199167 | |||||
| NDB_SV | FO080089.2 | |||||
| Secondary_accession | AC199167 | |||||
| AL031185 | ||||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 539 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wallis JM | ||||
| From_laboratory | RW | |||||
| Date_directory | 020430 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | cTel55X | ||||
| Remark | [061110 pad] Telomeric genomic sequence. This cosmid/contig/genomic sequence contains the telomeric chromosomal end repeat. | |||||
| Right_hand_telomere | ||||||
| [20070222 db] This clone was originally sequenced by the Sanger Center; ownership officially transferred to GSC | ||||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | c00c394850a04518cfa71c674ba4c95f | ||||
| Status | Finished | 03 Sep 1998 00:00:00 | ||||
| Submitted | 17 Dec 1998 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 9697 | ||
| Right | 9717 | |||||
| Interpolated_map_position | X | 24.6338 | ||||
| Assembly_tags | annotation | 7 | 7 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [x] Other Add a comment here - Reads from 6R55 say "G", reads from cTel55X say "A". | ||
| Finished Left | 1 | 4 | cTel55X | |||
| Finished Right | 2856 | 2859 | cTel55X | |||
| Method | Genomic_canonical |
