WormBase Tree Display for CDS: ZK484.2b
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| ZK484.2b | SMap | S_parent | Sequence | ZK484 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (13) | |||||
| DB_info | Database | KEGG | KEGG_id | 7.4.2.14 | ||
| TrEMBL | UniProtAcc | Q8IA64 | ||||
| UniProt | UniProtAcc | Q8IA64 | ||||
| AlphaFold | entry | Q8IA64 | ||||
| NCBI_protein | GI_number | GI:351058353 | ||||
| Protein_id | CHROMOSOME_I | CCD65799 | 1 | |||
| DB_remark | HAF-9 protein; contains similarity to Pfam domains PF00005 (ABC transporter), PF00664 (ABC transporter transmembrane region); contains similarity to Interpro domains IPR011527 (ABC transporter type 1, transmembrane domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR013305 (ABC transporter Tap-like), IPR039421 (Type 1 protein exporter), IPR003439 (ABC transporter-like, ATP-binding domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Accession_evidence | EMBL | BJ755730 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00001819 | ||||
| Corresponding_transcript | ZK484.2b.1 | |||||
| Corresponding_protein | CE33261 | |||||
| Corresponding_PCR_product | cenix:28-b2 | |||||
| mv_ZK484.2 | ||||||
| sjj_ZK484.2 | ||||||
| Corresponding_oligo_set (13) | ||||||
| RNAi_result | WBRNAi00059446 | |||||
| WBRNAi00002327 | ||||||
| WBRNAi00078232 | ||||||
| WBRNAi00004936 | ||||||
| WBRNAi00038304 | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | ABC-type antigen peptide transporter | Accession_evidence | UniProt | TR:Q8IA64 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | [20021211 sh] based on EST yk1044c11.3 | Curator_confirmed | WBPerson3157 | |||
| Method | curated |
