WormBase Tree Display for CDS: ZK1055.6b
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| ZK1055.6b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK1055 | |||
| Structure | Source_exons | 1 | 132 | |||
| 753 | 872 | |||||
| 929 | 1272 | |||||
| 1441 | 2086 | |||||
| 2898 | 3350 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | H2KZM0 | ||
| UniProt | UniProtAcc | H2KZM0 | ||||
| UniProt_GCRP | UniProtAcc | H2KZM0 | ||||
| AlphaFold | entry | H2KZM0 | ||||
| NCBI_protein | GI_number | GI:351061096 | ||||
| TREEFAM | TREEFAM_ID | TF316116 | ||||
| Protein_id | CHROMOSOME_V | CCD68850 | 1 | |||
| DB_remark | contains similarity to Pfam domains PF13598 (Domain of unknown function (DUF4139)), PF13600 (N-terminal domain of unknown function (DUF4140)); contains similarity to Interpro domains IPR011935 (Conserved hypothetical protein CHP02231), IPR037291 (Domain of unknown function DUF4139), IPR025554 (Domain of unknown function DUF4140) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | CB398042 | |||
| Inferred_automatically | transcript_builder | |||||
| Visible | Gene | WBGene00022847 | ||||
| Corresponding_transcript | ZK1055.6b.1 | |||||
| Corresponding_protein | CE29154 | |||||
| Corresponding_PCR_product | cenix:45-b2 | |||||
| mv_ZK1055.6 | ||||||
| sjj_ZK1055.6 | ||||||
| smd_ZK1055.6 | ||||||
| Corresponding_oligo_set | 185069_s_at | |||||
| A_12_P105599 | ||||||
| A_12_P117846 | ||||||
| A_12_P144710 | ||||||
| A_12_P144711 | ||||||
| A_12_P144712 | ||||||
| GPL13394_WBGene00022847 | ||||||
| GPL13914_ZK1055.6 | ||||||
| GPL14144_ZK1055.6b_1295-1354_0.912_14_B | ||||||
| GPL14144_ZK1055.6b_1431-1490_0.955_1_A | ||||||
| GPL14144_ZK1055.6b_995-1054_0.914_13_C | ||||||
| GPL19516_CGZ0056180 | ||||||
| GPL19516_CGZ0056181 | ||||||
| GPL21109_ZK1055.6a | ||||||
| GPL21109_ZK1055.6c | ||||||
| GPL3518_CE18475 | ||||||
| GPL3518_CE31138 | ||||||
| GPL8304_CE_WBGene00022847_A | ||||||
| GPL8673_ZK1055_6aP00449 | ||||||
| GPL8673_ZK1055_6aP01166 | ||||||
| GPL8673_ZK1055_6aP01484 | ||||||
| GPL8673_ZK1055_6cP00005 | ||||||
| GPL8673_ZK1055_6cP00019 | ||||||
| GPL8673_ZK1055_6cP00027 | ||||||
| GPL9450_ZK1055.6b | ||||||
| cea2.3.31044 | ||||||
| cea2.d.48175 | ||||||
| Matching_cDNA (23) | ||||||
| RNAi_result | WBRNAi00038130 | |||||
| WBRNAi00059079 | ||||||
| WBRNAi00064155 | ||||||
| Microarray_results (33) | ||||||
| Brief_identification | Protein F37C4.5 | Accession_evidence | UniProt | TR:H2KZM0 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf007450 | |||||
| Method | curated |
