WormBase Tree Display for CDS: ZC84.3

ZC84.3 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: ZC84
  Structure: Source_exons (12)
  DB_info: Database: SwissProt UniProtAcc Q03609
      UniProt UniProtAcc Q03609
      UniProt_GCRP UniProtAcc Q03609
      AlphaFold entry Q03609
      NCBI_protein GI_number GI:224492375
      TREEFAM TREEFAM_ID TF101155
    Protein_id: CHROMOSOME_III CAA79568 2
    DB_remark: CLS-3 protein; contains similarity to Pfam domain PF12348 (CLASP N terminal); contains similarity to Interpro domains IPR034085 (TOG domain), IPR024395 (CLASP N-terminal domain), IPR011989 (Armadillo-like helical), IPR016024 (Armadillo-type fold)
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
  Visible: Gene: WBGene00013847
    Corresponding_transcript: ZC84.3.1
    Corresponding_protein: CE43505
    Corresponding_PCR_product: TH:321D10
      cenix:321-d10
      mv_ZC84.3
      sjj_ZC84.3
      smd_ZC84.3
    Corresponding_oligo_set (16)
    Matching_cDNA (53)
    RNAi_result: WBRNAi00006060
      WBRNAi00073423
      WBRNAi00080603
      WBRNAi00021762
      WBRNAi00038105
      WBRNAi00000349
      WBRNAi00059026
    Microarray_results (19)
    Brief_identification: Protein CLASP-3 Accession_evidence: UniProt SP:Q03609
    RNASeq_FPKM (74)
    Last_reviewed: 16 Feb 2009 00:00:00 WBPerson1983
    Remark: Similarity to R107.6 suggests possible sequence problem. Splice acceptor at 9110 wanted
      [090216 pad] Gene prediction modified (exon 5) inline with protein homology and transcript data. Exon 5 now utilises a relatively weak splice site, but this does represent all available evidence. Accession_evidence: NDB FM247733
            BJ111569
        Curator_confirmed: WBPerson1983
  Associated_feature: WBsf007399
  Method: curated