WormBase Tree Display for Sequence: ZC412
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| ZC412 | DNA | ZC412 | 37595 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (15) | ||||
| CDS_child (152) | ||||||
| Transcript (19) | ||||||
| Nongenomic | yk311c7 | 25752 | 26451 | |||
| PCR_product (39) | ||||||
| Allele (526) | ||||||
| Oligo_set | Aff_ZC412.1 | 10273 | 8455 | |||
| Aff_ZC412.2 | 19645 | 18782 | ||||
| Aff_ZC412.3 | 26441 | 25743 | ||||
| Aff_ZC412.4 | 25155 | 24264 | ||||
| Aff_ZC412.5 | 31042 | 29812 | ||||
| Aff_ZC412.6 | 33962 | 34066 | ||||
| Aff_ZC412.7 | 36153 | 36049 | ||||
| Aff_ZC412.8 | 35394 | 35143 | ||||
| Aff_ZC412.9 | 37371 | 36931 | ||||
| Feature_object (322) | ||||||
| Feature_data | ZC412:Polysome | 1 | 37595 | |||
| ZC412:TranscriptionallyActiveRegion | 1 | 37595 | ||||
| ZC412:ChIPSeqTF | 1 | 37595 | ||||
| ZC412:TRF | 1 | 37595 | ||||
| ZC412:Dust | 1 | 37595 | ||||
| ZC412:inverted | 1 | 37595 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | H12D21 | 37492 | ||||
| Overlap_left | W06A7 | |||||
| Clone_left_end | ZC412 | 1 | ||||
| Clone_right_end | W06A7 | 9975 | ||||
| ZC412 | 37595 | |||||
| DB_info | Database | EMBL | NDB_AC | Z78067 | ||
| NDB_SV | Z78067.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Ainscough R | ||||
| From_laboratory | HX | |||||
| Date_directory | 960528 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | ZC412 | ||||
| Remark | [050322 pad] This clone shares a large direct repeat (3600bp) with H12D21 but there is suitable divergence and good clone coverage in this region to support the current assembly and overlap. | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 2d68ea9923b029c5dccd3cd3a0b74fe9 | ||||
| Status | Finished | 28 May 1996 00:00:00 | ||||
| Submitted | 09 Aug 1996 00:00:00 | |||||
| Annotated | 05 Aug 1996 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 8427 | ||
| Right | 8453 | |||||
| Interpolated_map_position | V | 6.97795 | ||||
| Assembly_tags | Clone left end | 1 | 6 | ZC412 | ||
| Finished Left | 1 | 6 | ||||
| annotation | 2768 | 2777 | some reads have 10 Ts some 11, is not cosmid specific so edit to 11 | |||
| 35495 | 35498 | putative site of end of overlap between ZC412 and W02B4 | ||||
| 36053 | 36055 | |||||
| Clone right end | 9970 | 9975 | right end of W06A7 | |||
| 37590 | 37595 | right end of ZC412 overlapping W02B4 | ||||
| Finished Right | 37590 | 37595 | ||||
| Method | Genomic_canonical |
