WormBase Tree Display for Sequence: Y73F4A
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| Y73F4A | DNA | Y73F4A | 28799 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00219626 | 23323 | 26231 | |
| WBGene00013516 | 3037 | 2071 | ||||
| WBGene00013514 | 7896 | 6538 | ||||
| WBGene00173905 | 27816 | 27796 | ||||
| WBGene00013515 | 5891 | 4931 | ||||
| CDS_child (67) | ||||||
| Transcript | Y73F4A.4 | 27816 | 27796 | |||
| Y73F4A.5 | 23323 | 26231 | ||||
| Y73F4A.1.1 | 7896 | 6538 | ||||
| Y73F4A.2.1 | 5891 | 4931 | ||||
| Y73F4A.3.1 | 3037 | 2071 | ||||
| Transposon | WBTransposon00000559 | 3929 | 4080 | |||
| Genomic_non_canonical | WRM0622bD01 | 9610 | 27371 | |||
| Nongenomic | yk367h9 | 5129 | 5589 | |||
| PCR_product (29) | ||||||
| Allele (281) | ||||||
| Oligo_set | Aff_Y73F4A.1 | 7838 | 6627 | |||
| Aff_Y73F4A.2 | 5854 | 5219 | ||||
| Aff_Y73F4A.3 | 3004 | 2189 | ||||
| Feature_object (200) | ||||||
| Feature_data | Y73F4A:Polysome | 1 | 28799 | |||
| Y73F4A:TranscriptionallyActiveRegion | 1 | 28799 | ||||
| Y73F4A:ChIPSeqTF | 1 | 28799 | ||||
| Y73F4A:TRF | 1 | 28799 | ||||
| Y73F4A:Dust | 1 | 28799 | ||||
| Y73F4A:inverted | 1 | 28799 | ||||
| Homol_data (15) | ||||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | ZC410 | 28696 | ||||
| Overlap_left | C53D6 | |||||
| Clone_left_end | ZC410 | 28696 | ||||
| Y73F4A | 1 | |||||
| Clone_right_end | C53D6 | 104 | ||||
| Y73F4A | 28799 | |||||
| DB_info | Database | EMBL | NDB_AC | AL032661 | ||
| NDB_SV | AL032661.2 | |||||
| Secondary_accession | AL022284 | |||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 1003 | |||||
| [121025] Sequence correction: SNP 0 bases @ 11371 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 11376 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Steward CA | ||||
| From_laboratory | HX | |||||
| Date_directory | 980730 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | Y73F4A | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 378e9e27f9d4ba0bc8b3c18fab930de4 | ||||
| Status | Finished | 30 Jul 1998 00:00:00 | ||||
| Submitted | 29 Oct 1998 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-IV | Ends | Left | 4534 | ||
| Right | 4551 | |||||
| Interpolated_map_position | IV | 4.01657 | ||||
| Assembly_tags | Clone right end | 101 | 104 | C53D6 | ||
| Clone left end | 28696 | 28701 | ZC410 | |||
| annotation | 28705 | 28705 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Add a comment here - This base was called A in ZC410 | |||
| 28713 | 28713 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Add a comment here - This base was called G in clone ZC410 | ||||
| 8210 | 11454 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [X] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here - This region contains forced joins and unsure bases. | ||||
| 28720 | 28799 | First select a Feature - [ ] Unsure [X] Misc_feature Then select the text for the note(s) - [X] Tandem repeat [ ] Single clone region [ ] Forced join [ ] Other Add a comment here - | ||||
| Finished Right | 28796 | 28799 | Y73F4A | |||
| Finished Left | 1 | 4 | Y73F4A | |||
| Method | Genomic_canonical |
