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WormBase Tree Display for CDS: Y54F10AL.1b

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Name Class

Y54F10AL.1bSMapS_parentSequenceY54F10AL
StructureSource_exons181
166252
11761370
31363253
35323628
39714160
DB_infoDatabaseTrEMBLUniProtAccQ9BL66
UniProtUniProtAccQ9BL66
AlphaFoldentryQ9BL66
NCBI_proteinGI_numberGI:351060907
Protein_idCHROMOSOME_IIICCD686431
DB_remarkcontains similarity to Pfam domain PF01169 (Uncharacterized protein family UPF0016); contains similarity to Interpro domain IPR001727 (GDT1-like)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBLCEK096E5R
VisibleGeneWBGene00021847
Corresponding_transcriptY54F10AL.1b.1
Corresponding_proteinCE27005
Corresponding_PCR_productmv_Y54F10AL.b
Corresponding_oligo_set (18)
Matching_cDNAmale_Nanopore_Roach_223Inferred_automaticallytranscript_builder.pl
L1_Nanopore_Roach_176Inferred_automaticallytranscript_builder.pl
EM_Nanopore_Li_176636Inferred_automaticallytranscript_builder.pl
YA_Nanopore_Li_181760Inferred_automaticallytranscript_builder.pl
OSTF30014C02Inferred_automaticallytranscript_builder.pl
Microarray_results (19)
Brief_identificationGDT1 family proteinAccession_evidenceUniProtTR:Q9BL66
RNASeq_FPKM (74)
Methodcurated