WormBase Tree Display for CDS: Y54F10AL.1a
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Y54F10AL.1a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y54F10AL | |||
Structure | Source_exons | 1 | 81 | |||
166 | 252 | |||||
1176 | 1370 | |||||
3136 | 3253 | |||||
3532 | 3628 | |||||
3971 | 4101 | |||||
5018 | 5116 | |||||
6096 | 6181 | |||||
DB_info | Database | TrEMBL | UniProtAcc | H2KZK9 | ||
UniProt | UniProtAcc | H2KZK9 | ||||
UniProt_GCRP | UniProtAcc | H2KZK9 | ||||
AlphaFold | entry | H2KZK9 | ||||
NCBI_protein | GI_number | GI:351060906 | ||||
TREEFAM | TREEFAM_ID | TF105960 | ||||
Protein_id | CHROMOSOME_III | CCD68642 | 1 | |||
DB_remark | contains similarity to Pfam domain PF01169 (Uncharacterized protein family UPF0016); contains similarity to Interpro domain IPR001727 (GDT1-like) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | EMBL | BJ818059 | |||
Inferred_automatically | transcript_builder | |||||
Visible | Gene | WBGene00021847 | ||||
Corresponding_transcript | Y54F10AL.1a.1 | |||||
Corresponding_protein | CE27004 | |||||
Corresponding_PCR_product | mv_Y54F10AL.b | |||||
sjj2_Y54F10AL.1a | ||||||
Corresponding_oligo_set (26) | ||||||
Matching_cDNA (38) | ||||||
Microarray_results (27) | ||||||
Brief_identification | GDT1 family protein | Accession_evidence | UniProt | TR:H2KZK9 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf014854 | |||||
Method | curated |