WormBase Tree Display for CDS: Y54E5A.5
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| Y54E5A.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y54E5A | |||
| Structure | Source_exons | 1 | 360 | |||
| 601 | 702 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9XWK2 | ||
| UniProt | UniProtAcc | Q9XWK2 | ||||
| UniProt_GCRP | UniProtAcc | Q9XWK2 | ||||
| AlphaFold | entry | Q9XWK2 | ||||
| NCBI_protein | GI_number | GI:3925273 | ||||
| TREEFAM | TREEFAM_ID | TF314442 | ||||
| Protein_id | CHROMOSOME_I | CAA21658 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF04669 (PBDC1 protein); contains similarity to Interpro domains IPR008476 (Protein PBDC1, metazoa/fungi), IPR023139 (PBDC1-like domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00013200 | ||||
| Corresponding_transcript | Y54E5A.5.1 | |||||
| Corresponding_protein | CE20316 | |||||
| Corresponding_PCR_product | cenix:214-f11 | |||||
| mv_G_YK7931 | ||||||
| sjj_Y54E5A.5 | ||||||
| smd_Y54E5A.5 | ||||||
| Corresponding_oligo_set (11) | ||||||
| Matching_cDNA (31) | ||||||
| RNAi_result | WBRNAi00061940 | |||||
| WBRNAi00033562 | ||||||
| WBRNAi00004742 | ||||||
| WBRNAi00057384 | ||||||
| WBRNAi00117006 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | Polysaccharide biosynthesis domain-containing protein | Accession_evidence | UniProt | TR:Q9XWK2 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf002360 | |||||
| WBsf014764 | ||||||
| Method | curated |
