WormBase Tree Display for CDS: Y48G8AL.6
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Y48G8AL.6 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Y48G8AL | ||
Structure | Source_exons | 1 | 147 | ||
1404 | 1945 | ||||
2529 | 2917 | ||||
3773 | 4713 | ||||
5945 | 6029 | ||||
6398 | 6705 | ||||
8377 | 8661 | ||||
10816 | 11029 | ||||
12594 | 12892 | ||||
DB_info | Database | KEGG | KEGG_id | 3.6.4.13 | |
SwissProt | UniProtAcc | O76512 | |||
UniProt | UniProtAcc | O76512 | |||
UniProt_GCRP | UniProtAcc | O76512 | |||
AlphaFold | entry | O76512 | |||
NCBI_protein | GI_number | GI:351051256 | |||
TREEFAM | TREEFAM_ID | TF300554 | |||
Protein_id | CHROMOSOME_I | CCD73461 | 1 | ||
DB_remark | SMG-2 protein; contains similarity to Pfam domains PF09416 (RNA helicase (UPF2 interacting domain)), PF13086 (AAA domain), PF13087 (AAA domain), PF18141 (RNA helicase UPF1, 1B domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR040812 (RNA helicase UPF1, 1B domain), IPR045055 (DNA2/NAM7-like helicase), IPR018999 (RNA helicase UPF1, Cys/His rich zinc-binding domain), IPR041677 (DNA2/NAM7 helicase, helicase domain) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (12) | |||||
Associated_feature | WBsf000058 | ||||
Method | curated |