WormBase Tree Display for CDS: Y47G6A.20b

Y47G6A.20b Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: Y47G6A
  Structure: Source_exons: 1 96
      154 318
      373 531
      918 1120
      2279 2492
      3169 3312
      3779 3913
      4883 5560
      6793 7248
  DB_info: Database: SwissProt UniProtAcc Q9N3S4
        UniProtIsoformAcc Q9N3S4-1
      UniProt UniProtAcc Q9N3S4
      UniProt_GCRP UniProtAcc Q9N3S4
      AlphaFold entry Q9N3S4
      NCBI_protein GI_number GI:373220165
      TREEFAM TREEFAM_ID TF313987
    Protein_id: CHROMOSOME_I CCD72565 1
    DB_remark: RNP-6 protein; contains similarity to Pfam domain PF00076 (RNA recognition motif); contains similarity to Interpro domains IPR006532 (Poly-U binding splicing factor, PUF60-like), IPR003954 (RNA recognition motif domain, eukaryote), IPR035979 (RNA-binding domain superfamily), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Accession_evidence: EMBL AV185909
  Visible: Gene: WBGene00004389
    Corresponding_transcript: Y47G6A.20b.1
    Corresponding_protein: CE24366
    Corresponding_PCR_product: cenix:90-g11
      mv_Y47G6A.20a
      mv_Y47G6A.20b
      sjj_Y47G6A_245.f
      sjj_Y47G6A_245.g
    Corresponding_oligo_set (35)
    Matching_cDNA (52)
    RNAi_result (17)
    Microarray_results (39)
    Brief_identification: Poly(U)-binding-splicing factor rnp-6 Accession_evidence: UniProt SP:Q9N3S4
    RNASeq_FPKM (74)
  Method: curated