WormBase Tree Display for CDS: Y47G6A.12
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Y47G6A.12 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y47G6A | |||
Structure | Source_exons | 1 | 744 | |||
795 | 954 | |||||
1012 | 1411 | |||||
2144 | 2369 | |||||
2419 | 2541 | |||||
2593 | 2894 | |||||
2945 | 3839 | |||||
4194 | 4372 | |||||
4423 | 4518 | |||||
4571 | 5234 | |||||
DB_info | Database | KEGG | KEGG_id | 3.4.22.49 | ||
SwissProt | UniProtAcc | G5ED39 | ||||
UniProt | UniProtAcc | G5ED39 | ||||
UniProt_GCRP | UniProtAcc | G5ED39 | ||||
AlphaFold | entry | G5ED39 | ||||
NCBI_protein | GI_number | GI:373220157 | ||||
TREEFAM | TREEFAM_ID | TF316858 | ||||
Protein_id | CHROMOSOME_I | CCD72557 | 1 | |||
DB_remark | SEP-1 protein; contains similarity to Pfam domain PF03568 (Peptidase family C50); contains similarity to Interpro domain IPR005314 (Peptidase C50, separase) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004775 | ||||
Corresponding_transcript | Y47G6A.12.1 | |||||
Corresponding_protein | CE22098 | |||||
Corresponding_PCR_product | [cgc4997]:sep-1 | |||||
cenix:72-d11 | ||||||
mv_Y47G6A.12 | ||||||
sjj_Y47G6A_246.b | ||||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (69) | ||||||
RNAi_result (20) | ||||||
Microarray_results (14) | ||||||
Brief_identification | Separin homolog sep-1 | Accession_evidence | UniProt | SP:G5ED39 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf000138 | |||||
Method | curated |