WormBase Tree Display for CDS: Y46G5A.5
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| Y46G5A.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y46G5A | |||
| Structure | Source_exons | 1 | 134 | |||
| 387 | 488 | |||||
| 564 | 823 | |||||
| 876 | 1042 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.7.8.11 | ||
| TrEMBL | UniProtAcc | Q9U2G1 | ||||
| UniProt | UniProtAcc | Q9U2G1 | ||||
| UniProt_GCRP | UniProtAcc | Q9U2G1 | ||||
| AlphaFold | entry | Q9U2G1 | ||||
| NCBI_protein | GI_number | GI:6425307 | ||||
| TREEFAM | TREEFAM_ID | TF314603 | ||||
| Protein_id | CHROMOSOME_II | CAB60350 | 1 | |||
| DB_remark | PISY-1 protein; contains similarity to Pfam domain PF01066 (CDP-alcohol phosphatidyltransferase); contains similarity to Interpro domains IPR014387 (CDP-diacylglycerol-inositol 3-phosphatidyltransferase, eukaryote), IPR000462 (CDP-alcohol phosphatidyltransferase), IPR043130 (CDP-alcohol phosphatidyltransferase, transmembrane domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00012897 | ||||
| Corresponding_transcript | Y46G5A.5.1 | |||||
| Corresponding_protein | CE21973 | |||||
| Corresponding_PCR_product | cenix:100-h10 | |||||
| mv_Y46G5A.5 | ||||||
| sjj_Y46G5.e | ||||||
| Corresponding_oligo_set | 181762_s_at | |||||
| GPL13914_Y46G5A.5 | ||||||
| GPL14144_Y46G5A.5_20-79_0.912_1_A | ||||||
| GPL14144_Y46G5A.5_375-434_0.631_14_C | ||||||
| GPL14144_Y46G5A.5_428-487_0.681_7_B | ||||||
| GPL3518_CE21973 | ||||||
| GPL8304_CE_WBGene00012897_A | ||||||
| GPL8673_Y46G5A_5P00074 | ||||||
| GPL8673_Y46G5A_5P00297 | ||||||
| GPL8673_Y46G5A_5P00524 | ||||||
| Matching_cDNA (45) | ||||||
| RNAi_result | WBRNAi00020650 | |||||
| WBRNAi00056693 | ||||||
| WBRNAi00037142 | ||||||
| Microarray_results (12) | ||||||
| Brief_identification | CDP-diacylglycerol--inositol 3-phosphatidyltransferase | Accession_evidence | UniProt | TR:Q9U2G1 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
