WormBase Tree Display for CDS: Y43F4B.5a
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Y43F4B.5a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Y43F4B | ||
Structure | Source_exons | 1 | 160 | ||
839 | 1185 | ||||
1252 | 1418 | ||||
1476 | 1769 | ||||
1838 | 2001 | ||||
2599 | 3254 | ||||
DB_info | Database | TrEMBL | UniProtAcc | O45934 | |
UniProt | UniProtAcc | O45934 | |||
UniProt_GCRP | UniProtAcc | O45934 | |||
AlphaFold | entry | O45934 | |||
NCBI_protein | GI_number | GI:3880930 | |||
TREEFAM | TREEFAM_ID | TF300692 | |||
Protein_id | CHROMOSOME_III | CAA16334 | 1 | ||
DB_remark | PGM-2 protein; contains similarity to Pfam domains PF02878 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I), PF02879 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II), PF02880 (Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III); contains similarity to Interpro domains IPR016055 (Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III), IPR005841 (Alpha-D-phosphohexomutase superfamily), IPR005845 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain II), IPR036900 (Alpha-D-phosphohexomutase, C-terminal domain superfamily), IPR005844 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain I), IPR005846 (Alpha-D-phosphohexomutase, alpha/beta/alpha domain III) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | BJ141774 | ||
Inferred_automatically | transcript_builder | ||||
Visible (12) | |||||
Associated_feature | WBsf002226 | ||||
WBsf010101 | |||||
Method | curated |