WormBase Tree Display for CDS: Y41E3.4a
expand all nodes | collapse all nodes | view schema
| Y41E3.4a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y41E3 | ||
| Structure | Source_exons | 1 | 249 | ||
| 321 | 656 | ||||
| 979 | 1464 | ||||
| 2157 | 2803 | ||||
| 3846 | 4373 | ||||
| 4433 | 4547 | ||||
| DB_info | Database | KEGG | KEGG_id | 6.1.1.18 | |
| SwissProt | UniProtAcc | O62431 | |||
| UniProt | UniProtAcc | O62431 | |||
| UniProt_GCRP | UniProtAcc | O62431 | |||
| AlphaFold | entry | O62431 | |||
| NCBI_protein | GI_number | GI:3880882 | |||
| TREEFAM | TREEFAM_ID | TF105683 | |||
| Protein_id | CHROMOSOME_IV | CAB08998 | 1 | ||
| DB_remark | QARS-1 protein; contains similarity to Pfam domains PF00749 (tRNA synthetases class I (E and Q), catalytic domain), PF03950 (tRNA synthetases class I (E and Q), anti-codon binding domain), PF04557 (Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2), PF04558 (Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1), PF20974 (tRNA synthetases class I (E and Q), anti-codon binding domain); contains similarity to Interpro domains IPR020056 (Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal), IPR049437 (tRNA synthetases class I (E and Q), anti-codon binding domain), IPR004514 (Glutamine-tRNA synthetase), IPR011035 (Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily), IPR007639 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal), IPR000924 (Glutamyl/glutaminyl-tRNA synthetase), IPR020059 (Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain), IPR020058 (Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain), IPR007638 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2), IPR014729 (Rossmann-like alpha/beta/alpha sandwich fold), IPR042559 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 2), IPR042558 (Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 1) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | C41494 | ||
| Visible (12) | |||||
| Associated_feature | WBsf003240 | ||||
| Method | curated |
