WormBase Tree Display for CDS: Y41C4A.14
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| Y41C4A.14 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y41C4A | |||
| Structure | Source_exons | 1 | 99 | |||
| 171 | 326 | |||||
| 386 | 526 | |||||
| 575 | 655 | |||||
| 1838 | 1927 | |||||
| 2074 | 2193 | |||||
| 2812 | 2928 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.1.11.2 | ||
| SwissProt | UniProtAcc | G5EC44 | ||||
| UniProt | UniProtAcc | G5EC44 | ||||
| UniProt_GCRP | UniProtAcc | G5EC44 | ||||
| AlphaFold | entry | G5EC44 | ||||
| NCBI_protein | GI_number | GI:15717886 | ||||
| TREEFAM | TREEFAM_ID | TF101211 | ||||
| Protein_id | CHROMOSOME_III | CAB63359 | 2 | |||
| DB_remark | MRT-2 protein; contains similarity to Pfam domain PF02144 (Repair protein Rad1/Rec1/Rad17); contains similarity to Interpro domains IPR046938 (DNA clamp superfamily), IPR003021 (Rad1/Rec1/Rad17), IPR003011 (Cell cycle checkpoint protein, Rad1) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00003417 | ||||
| Corresponding_transcript | Y41C4A.14.1 | |||||
| Y41C4A.14.2 | ||||||
| Corresponding_protein | CE29376 | |||||
| Corresponding_PCR_product | TH:330F10 | |||||
| cenix:330-f10 | ||||||
| mv_AAC95525 | ||||||
| mv_Y41C4A.14 | ||||||
| sjj_Y41C4A.14 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA (34) | ||||||
| RNAi_result | WBRNAi00064153 | |||||
| WBRNAi00022481 | ||||||
| WBRNAi00006768 | ||||||
| WBRNAi00064152 | ||||||
| WBRNAi00067556 | ||||||
| WBRNAi00064105 | ||||||
| WBRNAi00056356 | ||||||
| WBRNAi00027845 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | Cell cycle checkpoint protein RAD1 homolog mrt-2 | Accession_evidence | UniProt | SP:G5EC44 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
