WormBase Tree Display for CDS: Y113G7B.23a
expand all nodes | collapse all nodes | view schema
Y113G7B.23a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | Y113G7B | ||
Structure | Source_exons | 1 | 115 | ||
1712 | 2337 | ||||
3329 | 3421 | ||||
4803 | 5223 | ||||
7236 | 8201 | ||||
9454 | 9602 | ||||
DB_info | Database | TrEMBL | UniProtAcc | G5EF87 | |
UniProt | UniProtAcc | G5EF87 | |||
AlphaFold | entry | G5EF87 | |||
NCBI_protein | GI_number | GI:6456807 | |||
Protein_id | CHROMOSOME_V | CAB54337 | 2 | ||
DB_remark | SWSN-1 protein; contains similarity to Pfam domains PF00249 (Myb-like DNA-binding domain), PF04433 (SWIRM domain), PF16495 (SWIRM-associated region 1), PF16498 (SWIRM-associated domain at the C-terminal); contains similarity to Interpro domains IPR032451 (SMARCC, C-terminal), IPR032448 (SMARCC, SWIRM-associated domain), IPR001005 (SANT/Myb domain), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR009057 (Homeobox-like domain superfamily), IPR007526 (SWIRM domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | NDB | AF230279 | ||
Visible (12) | |||||
Associated_feature | WBsf131034 | ||||
Method | curated |