WormBase Tree Display for Sequence: Y105E8B
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Y105E8B | DNA | Y105E8B | 79272 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (17) | ||||
CDS_child (715) | ||||||
Transcript (39) | ||||||
Pseudogene | Y105E8B.10 | 69048 | 68334 | |||
Transposon | WBTransposon00000418 | 27166 | 27537 | |||
WBTransposon00000570 | 27102 | 26999 | ||||
PCR_product (55) | ||||||
Allele (1346) | ||||||
Oligo_set | Aff_Y105E8A.AA | 80133 | 78135 | |||
Aff_Y105E8A.K | 46733 | 49020 | ||||
Aff_Y105E8A.M | 51875 | 52172 | ||||
Aff_Y105E8A.N | 54576 | 60298 | ||||
Aff_Y105E8A.O | 61830 | 63945 | ||||
Aff_Y105E8A.Q | 70450 | 69233 | ||||
Aff_Y105E8A.T | 9970 | 9726 | ||||
Aff_Y105E8A.Y | 25954 | 23963 | ||||
Aff_Y105E8A.Z | 31050 | 30402 | ||||
Aff_Y54E5A.1 | 80699 | 79167 | ||||
Feature_object (780) | ||||||
Feature_data | Y105E8B:Polysome | 1 | 79272 | |||
Y105E8B:TranscriptionallyActiveRegion | 1 | 79272 | ||||
Y105E8B:ChIPSeqTF | 1 | 79272 | ||||
Y105E8B:TRF | 1 | 79272 | ||||
Y105E8B:Dust | 1 | 79272 | ||||
Y105E8B:inverted | 1 | 79272 | ||||
Homol_data (22) | ||||||
Structure | From | Source | CHROMOSOME_I | |||
Overlap_right | Y54E5A | 79168 | ||||
Overlap_left | Y105E8A | |||||
Clone_left_end | C26C6 | 79168 | ||||
Y105E8B | 1 | |||||
Clone_right_end | Y105E8B | 79272 | ||||
DB_info | Database | EMBL | NDB_AC | AL132877 | ||
NDB_SV | AL132877.5 | |||||
Secondary_accession | AL132879 | |||||
AL132880 | ||||||
DB_remark | [100415] Sequence correction: insertion 1 bases agatccacaGgaatcctc @ 14101 | |||||
[121025] Sequence correction: SNP 0 bases @ 65266 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Sulston JE | ||||
From_laboratory | HX | |||||
Date_directory | 100415 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | Y105E8B | ||||
Reference | WBPaper00018319 | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 70fff3f634bbb263f164b0ede5fe37c6 | ||||
Status | Finished | 23 Jul 2001 00:00:00 | ||||
Submitted | 09 Aug 2001 00:00:00 | |||||
Annotated | 16 Aug 2001 00:00:00 | |||||
Interpolated_map_position | I | 25.9603 | ||||
Assembly_tags | Finished Left | 1 | 4 | Y105E8B | ||
Finished Right | 104 | 101 | Y105E8A | |||
79269 | 79272 | Y105E8B | ||||
annotation | 21744 | 21719 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - in inverted repeat | |||
32981 | 32918 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [x] Single clone region [ ] Forced join [ ] Other Add a comment here - in inverted repeat | ||||
76255 | 76291 | First select a Feature - [ ] Unsure [x] Misc_feature Then select the text for the note(s) - [ ] Tandem repeat [ ] Single clone region [x] Forced join [ ] Other Add a comment here - in tandem repeat; no other candidate possible | ||||
Clone left end | 79168 | 79173 | Y54E5 | |||
Method | Genomic_canonical |